E. caballus Gene: 7SK - ENSECAG00000027151 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000027151
Name7SK
Description7SK RNA [Source:RFAM;Acc:RF00100]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
5.72e3
  • 5.72e3
75.21
  • 75.21
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
6.36e3
  • 6.36e3
  • 6.47e3
72.42
  • 72.42
  • 71.94
AEIR
  • AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
7.68e3
  • 7.68e3
66.69
  • 66.69
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
8.79e3
  • 8.79e3
61.87
  • 61.87
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.08e4
  • 1.08e4
53.37
  • 53.37
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
51.28
  • 51.28
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.22e4
  • 1.22e4
  • 1.39e4
  • 1.62e4
47.21
  • 47.21
  • 39.93
  • 29.77
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.23e4
  • 1.23e4
46.68
  • 46.68
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
45.21
  • 45.21
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.30e4
  • 1.30e4
  • 1.65e4
43.73
  • 43.73
  • 28.57
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.37e4
  • 1.37e4
  • 1.42e4
40.39
  • 40.39
  • 38.50
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.52e4
  • 1.52e4
34.06
  • 34.06
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.53e4
  • 1.53e4
33.76
  • 33.76
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.56e4
  • 1.56e4
  • 1.78e4
32.47
  • 32.47
  • 22.80
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.56e4
  • 1.56e4
32.36
  • 32.36
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.57e4
  • 1.57e4
32.04
  • 32.04
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.62e4
  • 1.62e4
29.75
  • 29.75
AEIR
  • AEIR
UBERON:0007106chorionic villus
  • UBERON:0000113post-juvenile adult stage
1.63e4
  • 1.63e4
29.52
  • 29.52
AEIR
  • AEIR
UBERON:0002018synovial membrane of synovial joint
  • UBERON:0018241prime adult stage
1.68e4
  • 1.68e4
27.07
  • 27.07
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.69e4
  • 1.69e4
26.86
  • 26.86
AEIR
  • AEIR
UBERON:0000088trophoblast
  • UBERON:0000068embryo stage
1.77e4
  • 1.77e4
23.31
  • 23.31
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000027151 (7SK)

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