E. caballus Gene: SNORD108 - ENSECAG00000027227 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000027227
NameSNORD108
DescriptionSmall nucleolar RNA SNORD108 [Source:RFAM;Acc:RF01158]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
752
  • 752
96.74
  • 96.74
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
958
  • 958
  • 1.88e3
95.85
  • 95.85
  • 91.86
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
4.46e3
  • 4.46e3
80.66
  • 80.66
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
6.92e3
  • 6.92e3
  • 9.65e3
70.00
  • 70.00
  • 58.15
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
8.58e3
  • 8.58e3
  • 9.67e3
  • 1.43e4
62.81
  • 62.81
  • 58.05
  • 38.12
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
9.33e3
  • 9.33e3
  • 1.85e4
59.52
  • 59.52
  • 19.65
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
9.51e3
  • 9.51e3
58.76
  • 58.76
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.08e4
  • 1.08e4
53.16
  • 53.16
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.11e4
  • 1.11e4
51.79
  • 51.79
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
1.67e4
  • 1.67e4
27.65
  • 27.65
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.74e4
  • 1.74e4
24.34
  • 24.34
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.80e4
  • 1.80e4
22.13
  • 22.13
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.85e4
  • 1.85e4
19.57
  • 19.57
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000027227 (SNORD108)

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