E. caballus Gene: snoU54 - ENSECAG00000027239 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000027239
NamesnoU54
DescriptionSmall nucleolar RNA U54 [Source:RFAM;Acc:RF01277]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.52e3
  • 1.52e3
  • 6.95e3
  • 8.30e3
93.42
  • 93.42
  • 69.86
  • 64.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.76e3
  • 1.76e3
92.37
  • 92.37
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
5.44e3
  • 5.44e3
  • 7.06e3
76.41
  • 76.41
  • 69.37
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
6.75e3
  • 6.75e3
70.72
  • 70.72
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
7.43e3
  • 7.43e3
67.80
  • 67.80
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
8.62e3
  • 8.62e3
62.62
  • 62.62
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
8.79e3
  • 8.79e3
61.89
  • 61.89
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
9.69e3
  • 9.69e3
  • 1.29e4
57.98
  • 57.98
  • 44.21
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
54.55
  • 54.55
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.06e4
  • 1.06e4
54.00
  • 54.00
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.10e4
  • 1.10e4
52.34
  • 52.34
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.13e4
  • 1.13e4
51.07
  • 51.07
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.35e4
  • 1.35e4
41.51
  • 41.51
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.64e4
  • 1.64e4
29.06
  • 29.06
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.83e4
  • 1.83e4
20.84
  • 20.84
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000027239 (snoU54)

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