E. caballus Gene: U6 - ENSECAG00000027332 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000027332
NameU6
DescriptionU6 spliceosomal RNA [Source:RFAM;Acc:RF00026]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
748
  • 748
96.76
  • 96.76
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.52e3
  • 1.52e3
  • 1.74e3
93.43
  • 93.43
  • 92.46
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
2.04e3
  • 2.04e3
91.16
  • 91.16
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
4.61e3
  • 4.61e3
  • 1.89e4
80.00
  • 80.00
  • 18.14
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
9.85e3
  • 9.85e3
  • 1.15e4
57.28
  • 57.28
  • 49.93
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.68e4
  • 1.68e4
27.18
  • 27.18
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.73e4
  • 1.73e4
25.09
  • 25.09
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.81e4
  • 1.81e4
21.55
  • 21.55
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.88e4
  • 1.88e4
18.56
  • 18.56
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.92e4
  • 1.92e4
16.71
  • 16.71
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000027332 (U6)

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