E. caballus Gene: U6 - ENSECAG00000027353 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000027353
NameU6
DescriptionU6 spliceosomal RNA [Source:RFAM;Acc:RF00026]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
3.28e3
  • 3.28e3
85.77
  • 85.77
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
  • 1.16e4
51.79
  • 51.79
  • 49.50
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
  • 1.64e4
  • 1.91e4
50.00
  • 50.00
  • 28.79
  • 17.25
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.62e4
  • 1.62e4
  • 1.68e4
29.91
  • 29.91
  • 27.24
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.68e4
  • 1.68e4
27.14
  • 27.14
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.75e4
  • 1.75e4
23.93
  • 23.93
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.92e4
  • 1.92e4
16.55
  • 16.55
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
2.01e4
  • 2.01e4
12.66
  • 12.66
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000027353 (U6)

Do not show this banner again