E. caballus Gene: U6atac - ENSECAG00000027357 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000027357
NameU6atac
DescriptionU6atac minor spliceosomal RNA [Source:RFAM;Acc:RF00619]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
4.14e3
  • 4.14e3
  • 6.35e3
82.04
  • 82.04
  • 72.48
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
8.76e3
  • 8.76e3
62.03
  • 62.03
AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
1.35e4
  • 1.35e4
41.63
  • 41.63
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
  • 1.73e4
34.79
  • 34.79
  • 24.95
AEIR
  • AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.68e4
  • 1.68e4
27.22
  • 27.22
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.83e4
  • 1.83e4
20.42
  • 20.42
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.84e4
  • 1.84e4
20.21
  • 20.21
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.95e4
  • 1.95e4
15.58
  • 15.58
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
2.00e4
  • 2.00e4
  • 2.27e4
13.12
  • 13.12
  • 1.47
AEIR
  • AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
2.03e4
  • 2.03e4
12.09
  • 12.09
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000027357 (U6atac)

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