E. caballus Gene: SCARNA23 - ENSECAG00000027431 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000027431
NameSCARNA23
DescriptionSmall Cajal body specific RNA 23 [Source:RFAM;Acc:RF00427]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
3.02e3
  • 3.02e3
  • 5.50e3
  • 5.80e3
  • 1.34e4
86.92
  • 86.92
  • 76.16
  • 74.84
  • 41.93
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
3.38e3
  • 3.38e3
  • 1.05e4
85.35
  • 85.35
  • 54.32
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
4.44e3
  • 4.44e3
  • 4.52e3
80.74
  • 80.74
  • 80.38
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
4.55e3
  • 4.55e3
80.26
  • 80.26
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
6.67e3
  • 6.67e3
71.06
  • 71.06
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
7.28e3
  • 7.28e3
  • 9.18e3
68.43
  • 68.43
  • 60.20
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
7.77e3
  • 7.77e3
66.29
  • 66.29
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
8.46e3
  • 8.46e3
63.31
  • 63.31
AEIR
  • AEIR
UBERON:0002031epithelium of bronchus
  • UBERON:0018241prime adult stage
8.59e3
  • 8.59e3
62.74
  • 62.74
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
54.50
  • 54.50
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.14e4
  • 1.14e4
50.42
  • 50.42
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
48.38
  • 48.38
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
45.09
  • 45.09
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
41.10
  • 41.10
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.39e4
  • 1.39e4
39.81
  • 39.81
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.70e4
  • 1.70e4
26.29
  • 26.29
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.78e4
  • 1.78e4
22.87
  • 22.87
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000027431 (SCARNA23)

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