E. caballus Gene: SCARNA3 - ENSECAG00000027641 - Equus caballus (horse)

General information

Ensembl IDENSECAG00000027641
NameSCARNA3
DescriptionSmall Cajal body specific RNA 3 [Source:RFAM;Acc:RF00565]
OrganismEquus caballus (horse)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
1.59e3
  • 1.59e3
93.12
  • 93.12
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
3.22e3
  • 3.22e3
  • 3.29e3
86.04
  • 86.04
  • 85.75
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • UBERON:0000113post-juvenile adult stage
5.71e3
  • 5.71e3
75.22
  • 75.22
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
8.86e3
  • 8.86e3
  • 1.12e4
61.60
  • 61.60
  • 51.54
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
51.26
  • 51.26
AEIR
  • AEIR
UBERON:0004345trophectoderm
  • UBERON:0000068embryo stage
1.22e4
  • 1.22e4
46.92
  • 46.92
AEIR
  • AEIR
UBERON:0000087inner cell mass
  • UBERON:0000068embryo stage
1.26e4
  • 1.26e4
45.43
  • 45.43
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.72e4
  • 1.72e4
25.28
  • 25.28
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.91e4
  • 1.91e4
17.16
  • 17.16
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
1.95e4
  • 1.95e4
15.49
  • 15.49
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
1.98e4
  • 1.98e4
14.27
  • 14.27
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSECAG00000027641 (SCARNA3)

Do not show this banner again