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E. europaeus Gene: ATG4B - ENSEEUG00000002730 - Erinaceus europaeus (hedgehog)

General information

Ensembl IDENSEEUG00000002730
NameATG4B
Descriptionautophagy related 4B, cysteine peptidase [Source:HGNC Symbol;Acc:HGNC:20790]
OrganismErinaceus europaeus (hedgehog)
Synonym(s)apg4b, autl1, dkfzp586d1822, kiaa0943
Orthologs(s)24 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
3.15e3
  • 3.15e3
80.23
  • 80.23
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
3.26e3
  • 3.26e3
79.55
  • 79.55
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
3.42e3
  • 3.42e3
78.57
  • 78.57
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSEEUG00000002730.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Opisthokonta2 genesCompare expression

Paralogy information comes from OMA : ENSEEUG00000002730.

Cross-references

EnsemblENSEEUG00000002730 (ATG4B)
HGNCHGNC:20790 (ATG4B)

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