E. europaeus Gene: SCN5A - ENSEEUG00000013865 - Erinaceus europaeus (hedgehog)

General information

Ensembl IDENSEEUG00000013865
NameSCN5A
Descriptionsodium channel, voltage gated, type V alpha subunit [Source:HGNC Symbol;Acc:HGNC:10593]
OrganismErinaceus europaeus (hedgehog)
Synonym(s)cdcd2, cmd1e, cmpd2, hb1, hb2, hbbd, hh1, iccd, ivf, lqt3, nav1.5, pfhb1, sss1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
9.74e3
  • 9.74e3
38.88029
  • 38.88029
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
20.30603
  • 20.30603
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSEEUG00000013865 (SCN5A)
HGNCHGNC:10593 (SCN5A)

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