Gene: SPTLC2 - ENSFCAG00000001634
- Felis catus (cat)
General information
| Ensembl ID | ENSFCAG00000001634 |
|---|---|
| Name | SPTLC2 |
| Description | serine palmitoyltransferase, long chain base subunit 2 [Source:HGNC Symbol;Acc:HGNC:11278] |
| Organism | Felis catus (cat) |
| Synonym(s) | hlcb2a, kiaa0526, lcb2, lcb2a |
| Orthologs(s) | 27 orthologs |
| Paralog(s) | 3 paralogs |
Expression
| Anat. entity ID | Anatomical entity | Developmental stage(s) | Rank score | Expression score | Sources |
|---|---|---|---|---|---|
| UBERON:0000955 | brain |
| 4.99e3
| 74.43
| AEIR
|
| UBERON:0000082 | adult mammalian kidney |
| 6.59e3
| 66.21
| AEIR
|
| UBERON:0002107 | liver |
| 7.15e3
| 63.34
| AEIR
|
| UBERON:0000451 | prefrontal cortex |
| 7.85e3
| 59.76
| AEIR
|
| UBERON:0000922 | embryo |
| 8.09e3
| 58.53
| AEIR
|
| UBERON:0002106 | spleen |
| 8.10e3
| 58.47
| AEIR
|
| UBERON:0000473 | testis |
| 8.16e3
| 58.16
| AEIR
|
| UBERON:0008816 | embryonic head |
| 8.40e3
| 56.95
| AEIR
|
| UBERON:1000017 | tip of external ear |
| 9.03e3
| 53.71
| AEIR
|
| UBERON:0010230 | eyeball of camera-type eye |
| 9.81e3
| 49.71
| AEIR
|
| UBERON:0000014 | zone of skin |
| 1.02e4
| 47.81
| AEIR
|
| UBERON:0000995 | uterus |
| 1.03e4
| 47.10
| AEIR
|
| A | Affymetrix |
|---|---|
| E | EST |
| I | In Situ |
| R | RNA-Seq |
| data |
| no data |
| 3.25e4 | lightgrey: low confidence scores |
|---|---|
| important score variation |
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.
Orthologs
Orthology information comes from OMA : ENSFCAG00000001634.
Paralogs (same species)
| Taxon name | Gene(s) | Expression comparison | See details |
|---|---|---|---|
| Chordata | 1 gene
| Compare expression | |
| Eukaryota | 3 genes
| Compare expression |
Paralogy information comes from OMA : ENSFCAG00000001634.
Cross-references
| Ensembl | ENSFCAG00000001634 (SPTLC2) |
|---|---|
| HGNC | HGNC:11278 (SPTLC2) |
| EMBL | AANG02015584, AANG02015865, AANG02015866, AANG02015867, AANG02015868, AANG02015869, AANG02015870, AANG02015871 |
| Uniprot/SPTREMBL | M3VX05, M3VX05_FELCA |