F. catus Gene: LSAMP - ENSFCAG00000004320 - Felis catus (cat)

General information

Ensembl IDENSFCAG00000004320
NameLSAMP
Descriptionlimbic system-associated membrane protein [Source:HGNC Symbol;Acc:HGNC:6705]
OrganismFelis catus (cat)
Synonym(s)iglon3, lamp
Orthologs(s)22 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000112sexually immature stage
1.02e3
  • 1.02e3
94.79
  • 94.79
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.24e3
  • 1.24e3
93.63
  • 93.63
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
5.35e3
  • 5.35e3
72.56
  • 72.56
AEIR
  • AEIR
UBERON:0008816embryonic head
  • UBERON:0000068embryo stage
6.59e3
  • 6.59e3
66.21
  • 66.21
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
6.95e3
  • 6.95e3
64.37
  • 64.37
AEIR
  • AEIR
UBERON:0010230eyeball of camera-type eye
  • UBERON:0000112sexually immature stage
7.31e3
  • 7.31e3
62.53
  • 62.53
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.16e4
  • 1.16e4
40.55
  • 40.55
AEIR
  • AEIR
UBERON:1000017tip of external ear
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
37.88
  • 37.88
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
36.50
  • 36.50
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
31.67
  • 31.67
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
31.32
  • 31.32
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
28.47
  • 28.47
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSFCAG00000004320.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata4 genesCompare expression

Paralogy information comes from OMA : ENSFCAG00000004320.

Cross-references

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