F. catus Gene: PPFIA1 - ENSFCAG00000004765 - Felis catus (cat)

General information

Ensembl IDENSFCAG00000004765
NamePPFIA1
Descriptionprotein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
OrganismFelis catus (cat)
Synonym(s)lip.1, liprin
Orthologs(s)23 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
4.96e3
  • 4.96e3
74.56
  • 74.56
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
5.19e3
  • 5.19e3
73.40
  • 73.40
AEIR
  • AEIR
UBERON:1000017tip of external ear
  • UBERON:0018241prime adult stage
5.38e3
  • 5.38e3
72.42
  • 72.42
AEIR
  • AEIR
UBERON:0010230eyeball of camera-type eye
  • UBERON:0000112sexually immature stage
5.81e3
  • 5.81e3
70.24
  • 70.24
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
6.27e3
  • 6.27e3
67.83
  • 67.83
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
6.36e3
  • 6.36e3
67.39
  • 67.39
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
6.62e3
  • 6.62e3
66.05
  • 66.05
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
6.72e3
  • 6.72e3
65.57
  • 65.57
AEIR
  • AEIR
UBERON:0008816embryonic head
  • UBERON:0000068embryo stage
6.75e3
  • 6.75e3
65.38
  • 65.38
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000112sexually immature stage
7.36e3
  • 7.36e3
62.28
  • 62.28
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
7.37e3
  • 7.37e3
62.20
  • 62.20
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
8.38e3
  • 8.38e3
57.04
  • 57.04
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSFCAG00000004765.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression
Bilateria3 genesCompare expression

Paralogy information comes from OMA : ENSFCAG00000004765.

Cross-references

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