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F. catus Gene: XRCC1 - ENSFCAG00000005222 - Felis catus (cat)

General information

Ensembl IDENSFCAG00000005222
NameXRCC1
DescriptionX-ray repair complementing defective repair in Chinese hamster cells 1 [Source:HGNC Symbol;Acc:HGNC:12828]
OrganismFelis catus (cat)
Synonym(s)rcc
Orthologs(s)23 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
3.77e3
  • 3.77e3
80.65
  • 80.65
AEIR
  • AEIR
UBERON:0008816embryonic head
  • UBERON:0000068embryo stage
3.80e3
  • 3.80e3
80.50
  • 80.50
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
3.88e3
  • 3.88e3
80.12
  • 80.12
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
4.28e3
  • 4.28e3
78.04
  • 78.04
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
4.72e3
  • 4.72e3
75.82
  • 75.82
AEIR
  • AEIR
UBERON:0010230eyeball of camera-type eye
  • UBERON:0000112sexually immature stage
4.93e3
  • 4.93e3
74.74
  • 74.74
AEIR
  • AEIR
UBERON:1000017tip of external ear
  • UBERON:0018241prime adult stage
5.01e3
  • 5.01e3
74.32
  • 74.32
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
5.50e3
  • 5.50e3
71.80
  • 71.80
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
5.81e3
  • 5.81e3
70.21
  • 70.21
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
6.67e3
  • 6.67e3
65.78
  • 65.78
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
7.55e3
  • 7.55e3
61.27
  • 61.27
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000112sexually immature stage
9.32e3
  • 9.32e3
52.21
  • 52.21
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSFCAG00000005222.

Cross-references

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