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F. catus Gene: SLC8A1 - ENSFCAG00000006812 - Felis catus (cat)

General information

Ensembl IDENSFCAG00000006812
NameSLC8A1
Descriptionsodium/calcium exchanger 1 precursor [Source:RefSeq peptide;Acc:NP_001009848]
OrganismFelis catus (cat)
Synonym(s)ncx1
Orthologs(s)23 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000112sexually immature stage
985
  • 985
94.95
  • 94.95
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
4.30e3
  • 4.30e3
77.96
  • 77.96
AEIR
  • AEIR
UBERON:0008816embryonic head
  • UBERON:0000068embryo stage
4.39e3
  • 4.39e3
77.52
  • 77.52
AEIR
  • AEIR
UBERON:0010230eyeball of camera-type eye
  • UBERON:0000112sexually immature stage
9.21e3
  • 9.21e3
52.75
  • 52.75
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
9.80e3
  • 9.80e3
49.77
  • 49.77
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
45.13
  • 45.13
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
43.37
  • 43.37
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
41.71
  • 41.71
AEIR
  • AEIR
UBERON:1000017tip of external ear
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
29.85
  • 29.85
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
1.44e4
  • 1.44e4
26.02
  • 26.02
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression
Bilateria22 species23 genesCompare expression

Orthology information comes from OMA : ENSFCAG00000006812.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata2 genesCompare expression

Paralogy information comes from OMA : ENSFCAG00000006812.

Cross-references

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