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F. catus Gene: VTN - ENSFCAG00000008399 - Felis catus (cat)

General information

Ensembl IDENSFCAG00000008399
NameVTN
Descriptionvitronectin [Source:HGNC Symbol;Acc:HGNC:12724]
OrganismFelis catus (cat)
Synonym(s)vn
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0018241prime adult stage
65.9
  • 65.9
99.67
  • 99.67
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
813
  • 813
95.83
  • 95.83
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
6.25e3
  • 6.25e3
67.93
  • 67.93
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
6.73e3
  • 6.73e3
65.47
  • 65.47
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
7.26e3
  • 7.26e3
62.80
  • 62.80
AEIR
  • AEIR
UBERON:0010230eyeball of camera-type eye
  • UBERON:0000112sexually immature stage
8.89e3
  • 8.89e3
54.42
  • 54.42
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
44.47
  • 44.47
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
40.96
  • 40.96
AEIR
  • AEIR
UBERON:1000017tip of external ear
  • UBERON:0018241prime adult stage
1.31e4
  • 1.31e4
32.75
  • 32.75
AEIR
  • AEIR
UBERON:0008816embryonic head
  • UBERON:0000068embryo stage
1.32e4
  • 1.32e4
32.41
  • 32.41
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.48e4
  • 1.48e4
23.91
  • 23.91
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species19 genesCompare expression

Orthology information comes from OMA : ENSFCAG00000008399.

Cross-references

EnsemblENSFCAG00000008399 (VTN)
HGNCHGNC:12724 (VTN)
EMBLAANG02080247
Uniprot/SPTREMBLM3W9I5, M3W9I5_FELCA

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