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F. catus Gene: RSPH1 - ENSFCAG00000012707 - Felis catus (cat)

General information

Ensembl IDENSFCAG00000012707
NameRSPH1
Descriptionradial spoke head 1 homolog (Chlamydomonas) [Source:HGNC Symbol;Acc:HGNC:12371]
OrganismFelis catus (cat)
Synonym(s)cild24, flj32753, rsp44, rsph10a, tsga2
Orthologs(s)15 orthologs
Paralog(s)324 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.95e3
  • 1.95e3
89.98
  • 89.98
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
5.37e3
  • 5.37e3
72.49
  • 72.49
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
8.71e3
  • 8.71e3
55.35
  • 55.35
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
43.35
  • 43.35
AEIR
  • AEIR
UBERON:0010230eyeball of camera-type eye
  • UBERON:0000112sexually immature stage
1.37e4
  • 1.37e4
29.95
  • 29.95
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000112sexually immature stage
1.37e4
  • 1.37e4
29.56
  • 29.56
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.43e4
  • 1.43e4
26.86
  • 26.86
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.59e4
  • 1.59e4
18.24
  • 18.24
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.62e4
  • 1.62e4
17.06
  • 17.06
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression

Orthology information comes from OMA : ENSFCAG00000012707.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota324 genesCompare expression

Paralogy information comes from OMA : ENSFCAG00000012707.

Cross-references

EnsemblENSFCAG00000012707 (RSPH1)
HGNCHGNC:12371 (RSPH1)
EMBLAANG02044585, AANG02044586
Uniprot/SPTREMBLM3WHF6, M3WHF6_FELCA

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