F. catus Gene: VAX2 - ENSFCAG00000013449 - Felis catus (cat)

General information

Ensembl IDENSFCAG00000013449
NameVAX2
Descriptionventral anterior homeobox 2 [Source:HGNC Symbol;Acc:HGNC:12661]
OrganismFelis catus (cat)
Synonym(s)dres93
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0010230eyeball of camera-type eye
  • UBERON:0000112sexually immature stage
1.24e4
  • 1.24e4
36.44
  • 36.44
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
24.04
  • 24.04
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
22.98
  • 22.98
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.59e4
  • 1.59e4
18.27
  • 18.27
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.62e4
  • 1.62e4
17.16
  • 17.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression

Orthology information comes from OMA : ENSFCAG00000013449.

Cross-references

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