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F. catus Gene: DDX39A - ENSFCAG00000013488 - Felis catus (cat)

General information

Ensembl IDENSFCAG00000013488
NameDDX39A
DescriptionDEAD (Asp-Glu-Ala-Asp) box polypeptide 39A [Source:HGNC Symbol;Acc:HGNC:17821]
OrganismFelis catus (cat)
Synonym(s)bat1l, ddx39, ddxl, urh49
Orthologs(s)19 orthologs
Paralog(s)324 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.09e3
  • 1.09e3
94.39
  • 94.39
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
2.45e3
  • 2.45e3
87.43
  • 87.43
AEIR
  • AEIR
UBERON:1000017tip of external ear
  • UBERON:0018241prime adult stage
4.20e3
  • 4.20e3
78.48
  • 78.48
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
5.04e3
  • 5.04e3
74.14
  • 74.14
AEIR
  • AEIR
UBERON:0010230eyeball of camera-type eye
  • UBERON:0000112sexually immature stage
5.72e3
  • 5.72e3
70.66
  • 70.66
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
5.86e3
  • 5.86e3
69.97
  • 69.97
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
6.27e3
  • 6.27e3
67.85
  • 67.85
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
7.73e3
  • 7.73e3
60.38
  • 60.38
AEIR
  • AEIR
UBERON:0008816embryonic head
  • UBERON:0000068embryo stage
8.01e3
  • 8.01e3
58.93
  • 58.93
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
8.03e3
  • 8.03e3
58.83
  • 58.83
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000112sexually immature stage
8.57e3
  • 8.57e3
56.07
  • 56.07
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
46.92
  • 46.92
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Theria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Bilateria19 species19 genesCompare expression

Orthology information comes from OMA : ENSFCAG00000013488.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Mammalia1 geneCompare expression
Eukaryota324 genesCompare expression

Paralogy information comes from OMA : ENSFCAG00000013488.

Cross-references

EnsemblENSFCAG00000013488 (DDX39A)
HGNCHGNC:17821 (DDX39A)
EMBLAANG02080129
Uniprot/SPTREMBLM3WIY3, M3WIY3_FELCA

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