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F. catus Gene: CIRBP - ENSFCAG00000013724 - Felis catus (cat)

General information

Ensembl IDENSFCAG00000013724
NameCIRBP
Descriptioncold inducible RNA binding protein [Source:HGNC Symbol;Acc:HGNC:1982]
OrganismFelis catus (cat)
Synonym(s)cirp
Orthologs(s)14 orthologs
Paralog(s)324 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0010230eyeball of camera-type eye
  • UBERON:0000112sexually immature stage
607
  • 607
96.89
  • 96.89
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
843
  • 843
95.68
  • 95.68
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
953
  • 953
95.12
  • 95.12
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
991
  • 991
94.92
  • 94.92
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.32e3
  • 1.32e3
93.22
  • 93.22
AEIR
  • AEIR
UBERON:0008816embryonic head
  • UBERON:0000068embryo stage
1.33e3
  • 1.33e3
93.19
  • 93.19
AEIR
  • AEIR
UBERON:1000017tip of external ear
  • UBERON:0018241prime adult stage
1.48e3
  • 1.48e3
92.40
  • 92.40
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.56e3
  • 1.56e3
92.02
  • 92.02
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.60e3
  • 1.60e3
91.80
  • 91.80
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000112sexually immature stage
2.87e3
  • 2.87e3
85.29
  • 85.29
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
3.30e3
  • 3.30e3
83.06
  • 83.06
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria9 species9 genesCompare expression
Theria10 species10 genesCompare expression
Mammalia11 species11 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression

Orthology information comes from OMA : ENSFCAG00000013724.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression
Eukaryota324 genesCompare expression

Paralogy information comes from OMA : ENSFCAG00000013724.

Cross-references

EnsemblENSFCAG00000013724 (CIRBP)
HGNCHGNC:1982 (CIRBP)
EMBLAANG02052735, AANG02052736
Uniprot/SPTREMBLM3WJD5, M3WJD5_FELCA

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