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F. catus Gene: SMC1A - ENSFCAG00000013897 - Felis catus (cat)

General information

Ensembl IDENSFCAG00000013897
NameSMC1A
Descriptionstructural maintenance of chromosomes 1A [Source:HGNC Symbol;Acc:HGNC:11111]
OrganismFelis catus (cat)
Synonym(s)dxs423e, kiaa0178, sb1.8, smc1l1, smcb
Orthologs(s)20 orthologs
Paralog(s)324 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0008816embryonic head
  • UBERON:0000068embryo stage
2.20e3
  • 2.20e3
88.72
  • 88.72
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
3.16e3
  • 3.16e3
83.78
  • 83.78
AEIR
  • AEIR
UBERON:1000017tip of external ear
  • UBERON:0018241prime adult stage
5.51e3
  • 5.51e3
71.77
  • 71.77
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
5.53e3
  • 5.53e3
71.67
  • 71.67
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000112sexually immature stage
6.58e3
  • 6.58e3
66.26
  • 66.26
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
7.02e3
  • 7.02e3
63.99
  • 63.99
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
7.35e3
  • 7.35e3
62.31
  • 62.31
AEIR
  • AEIR
UBERON:0010230eyeball of camera-type eye
  • UBERON:0000112sexually immature stage
7.46e3
  • 7.46e3
61.73
  • 61.73
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
7.88e3
  • 7.88e3
59.59
  • 59.59
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
8.06e3
  • 8.06e3
58.69
  • 58.69
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
41.60
  • 41.60
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Tetrapoda11 species11 genesCompare expression
Euteleostomi12 species13 genesCompare expression
Bilateria19 species20 genesCompare expression

Orthology information comes from OMA : ENSFCAG00000013897.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Opisthokonta1 geneCompare expression
Eukaryota324 genesCompare expression

Paralogy information comes from OMA : ENSFCAG00000013897.

Cross-references

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