We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

F. catus Gene: SSR3 - ENSFCAG00000028606 - Felis catus (cat)

General information

Ensembl IDENSFCAG00000028606
NameSSR3
Descriptionsignal sequence receptor, gamma (translocon-associated protein gamma) [Source:HGNC Symbol;Acc:HGNC:11325]
OrganismFelis catus (cat)
Synonym(s)trapg
Orthologs(s)22 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
901
  • 901
95.39
  • 95.39
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
927
  • 927
95.25
  • 95.25
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
949
  • 949
95.14
  • 95.14
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
950
  • 950
95.14
  • 95.14
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
961
  • 961
95.08
  • 95.08
AEIR
  • AEIR
UBERON:0010230eyeball of camera-type eye
  • UBERON:0000112sexually immature stage
1.09e3
  • 1.09e3
94.41
  • 94.41
AEIR
  • AEIR
UBERON:0008816embryonic head
  • UBERON:0000068embryo stage
1.35e3
  • 1.35e3
93.10
  • 93.10
AEIR
  • AEIR
UBERON:1000017tip of external ear
  • UBERON:0018241prime adult stage
1.40e3
  • 1.40e3
92.84
  • 92.84
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.40e3
  • 1.40e3
92.83
  • 92.83
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.48e3
  • 1.48e3
92.42
  • 92.42
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000112sexually immature stage
2.09e3
  • 2.09e3
89.28
  • 89.28
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
3.92e3
  • 3.92e3
79.88
  • 79.88
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Theria11 species11 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSFCAG00000028606.

Cross-references

EnsemblENSFCAG00000028606 (SSR3)
HGNCHGNC:11325 (SSR3)
EMBLAANG02170763
Uniprot/SPTREMBLM3X2V2, M3X2V2_FELCA

Do not show this banner again