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F. catus Gene: TUBA1A - ENSFCAG00000028689 - Felis catus (cat)

General information

Ensembl IDENSFCAG00000028689
NameTUBA1A
Descriptiontubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
OrganismFelis catus (cat)
Synonym(s)b-alpha-1, flj25113, tuba1b, tuba1c, tuba3
Orthologs(s)27 orthologs
Paralog(s)19 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000112sexually immature stage
29.5
  • 29.5
99.85
  • 99.85
AEIR
  • AEIR
UBERON:0008816embryonic head
  • UBERON:0000068embryo stage
39.0
  • 39.0
99.81
  • 99.81
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
46.4
  • 46.4
99.77
  • 99.77
AEIR
  • AEIR
UBERON:0010230eyeball of camera-type eye
  • UBERON:0000112sexually immature stage
130
  • 130
99.34
  • 99.34
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
175
  • 175
99.11
  • 99.11
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
290
  • 290
98.52
  • 98.52
AEIR
  • AEIR
UBERON:1000017tip of external ear
  • UBERON:0018241prime adult stage
358
  • 358
98.17
  • 98.17
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
564
  • 564
97.11
  • 97.11
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.04e3
  • 1.04e3
94.67
  • 94.67
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.25e3
  • 1.25e3
93.60
  • 93.60
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
2.81e3
  • 2.81e3
85.61
  • 85.61
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species3 genesCompare expression
Laurasiatheria5 species11 genesCompare expression
Boreoeutheria10 species23 genesCompare expression
Mammalia11 species24 genesCompare expression
Amniota12 species25 genesCompare expression
Euteleostomi13 species27 genesCompare expression

Orthology information comes from OMA : ENSFCAG00000028689.

Paralogs (same species)

Cross-references

EnsemblENSFCAG00000028689 (TUBA1A)
HGNCHGNC:20766 (TUBA1A)
EMBLAANG02100601
Uniprot/SPTREMBLM3WER4, M3WER4_FELCA

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