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F. catus Gene: C1GALT1 - ENSFCAG00000029442 - Felis catus (cat)

General information

Ensembl IDENSFCAG00000029442
NameC1GALT1
Descriptioncore 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24337]
OrganismFelis catus (cat)
Synonym(s)c1galt, t-synthase
Orthologs(s)26 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0018241prime adult stage
4.87e3
  • 4.87e3
75.03
  • 75.03
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
5.45e3
  • 5.45e3
72.06
  • 72.06
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
5.88e3
  • 5.88e3
69.83
  • 69.83
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
6.50e3
  • 6.50e3
66.67
  • 66.67
AEIR
  • AEIR
UBERON:0008816embryonic head
  • UBERON:0000068embryo stage
6.76e3
  • 6.76e3
65.32
  • 65.32
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
7.68e3
  • 7.68e3
60.63
  • 60.63
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
8.28e3
  • 8.28e3
57.55
  • 57.55
AEIR
  • AEIR
UBERON:1000017tip of external ear
  • UBERON:0018241prime adult stage
8.56e3
  • 8.56e3
56.09
  • 56.09
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000112sexually immature stage
8.69e3
  • 8.69e3
55.46
  • 55.46
AEIR
  • AEIR
UBERON:0010230eyeball of camera-type eye
  • UBERON:0000112sexually immature stage
1.04e4
  • 1.04e4
46.83
  • 46.83
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.23e4
  • 1.23e4
37.18
  • 37.18
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Bilateria22 species26 genesCompare expression

Orthology information comes from OMA : ENSFCAG00000029442.

Cross-references

EnsemblENSFCAG00000029442 (C1GALT1)
HGNCHGNC:24337 (C1GALT1)
EMBLAANG02133869, AANG02133870, AANG02133871
Uniprot/SPTREMBLM3WT46, M3WT46_FELCA

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