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F. catus Gene: CDHR4 - ENSFCAG00000029853 - Felis catus (cat)

General information

Ensembl IDENSFCAG00000029853
NameCDHR4
Descriptioncadherin related family member 4 [Source:HGNC Symbol;Acc:HGNC:34527]
OrganismFelis catus (cat)
Synonym(s)cdh29, vllr9392
Orthologs(s)13 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
48.33
  • 48.33
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
46.56
  • 46.56
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
46.22
  • 46.22
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.29e4
  • 1.29e4
33.63
  • 33.63
AEIR
  • AEIR
UBERON:0008816embryonic head
  • UBERON:0000068embryo stage
1.33e4
  • 1.33e4
31.69
  • 31.69
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
29.90
  • 29.90
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
28.62
  • 28.62
AEIR
  • AEIR
UBERON:1000017tip of external ear
  • UBERON:0018241prime adult stage
1.44e4
  • 1.44e4
25.96
  • 25.96
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
23.96
  • 23.96
AEIR
  • AEIR
UBERON:0010230eyeball of camera-type eye
  • UBERON:0000112sexually immature stage
1.57e4
  • 1.57e4
19.71
  • 19.71
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Amniota12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression

Orthology information comes from OMA : ENSFCAG00000029853.

Cross-references

EnsemblENSFCAG00000029853 (CDHR4)
HGNCHGNC:34527 (CDHR4)
EMBLAANG02078470, AANG02078539
Uniprot/SPTREMBLM3X857, M3X857_FELCA

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