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F. catus Gene: SMIM3 - ENSFCAG00000030067 - Felis catus (cat)

General information

Ensembl IDENSFCAG00000030067
NameSMIM3
Descriptionsmall integral membrane protein 3 [Source:HGNC Symbol;Acc:HGNC:30248]
OrganismFelis catus (cat)
Synonym(s)c5orf62, mstp150, nid67
Orthologs(s)11 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0010230eyeball of camera-type eye
  • UBERON:0000112sexually immature stage
643
  • 643
96.71
  • 96.71
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.05e3
  • 1.05e3
94.60
  • 94.60
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.13e3
  • 1.13e3
94.23
  • 94.23
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
1.31e3
  • 1.31e3
93.30
  • 93.30
AEIR
  • AEIR
UBERON:0008816embryonic head
  • UBERON:0000068embryo stage
1.62e3
  • 1.62e3
91.72
  • 91.72
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
2.07e3
  • 2.07e3
89.39
  • 89.39
AEIR
  • AEIR
UBERON:1000017tip of external ear
  • UBERON:0018241prime adult stage
2.08e3
  • 2.08e3
89.33
  • 89.33
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
3.66e3
  • 3.66e3
81.21
  • 81.21
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
6.37e3
  • 6.37e3
67.32
  • 67.32
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
7.75e3
  • 7.75e3
60.24
  • 60.24
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.41e4
  • 1.41e4
27.73
  • 27.73
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Mammalia11 species11 genesCompare expression

Orthology information comes from OMA : ENSFCAG00000030067.

Cross-references

EnsemblENSFCAG00000030067 (SMIM3)
HGNCHGNC:30248 (SMIM3)
EMBLAANG02177338
Uniprot/SPTREMBLM3XAR3, M3XAR3_FELCA

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