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F. catus Gene: XRCC6BP1 - ENSFCAG00000030243 - Felis catus (cat)

General information

Ensembl IDENSFCAG00000030243
NameXRCC6BP1
DescriptionXRCC6 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:29452]
OrganismFelis catus (cat)
Synonym(s)kub3
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0010230eyeball of camera-type eye
  • UBERON:0000112sexually immature stage
4.85e3
  • 4.85e3
75.16
  • 75.16
AEIR
  • AEIR
UBERON:0008816embryonic head
  • UBERON:0000068embryo stage
5.98e3
  • 5.98e3
69.33
  • 69.33
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
6.96e3
  • 6.96e3
64.29
  • 64.29
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
6.98e3
  • 6.98e3
64.19
  • 64.19
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
7.51e3
  • 7.51e3
61.48
  • 61.48
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
8.08e3
  • 8.08e3
58.55
  • 58.55
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
8.60e3
  • 8.60e3
55.88
  • 55.88
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
9.05e3
  • 9.05e3
53.57
  • 53.57
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000112sexually immature stage
9.13e3
  • 9.13e3
53.20
  • 53.20
AEIR
  • AEIR
UBERON:1000017tip of external ear
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
45.51
  • 45.51
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
36.42
  • 36.42
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression

Orthology information comes from OMA : ENSFCAG00000030243.

Cross-references

EnsemblENSFCAG00000030243 (XRCC6BP1)
HGNCHGNC:29452 (XRCC6BP1)
EMBLAANG02132180
Uniprot/SPTREMBLM3XA84, M3XA84_FELCA

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