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F. catus Gene: NRN1 - ENSFCAG00000030503 - Felis catus (cat)

General information

Ensembl IDENSFCAG00000030503
NameNRN1
Descriptionneuritin 1 [Source:HGNC Symbol;Acc:HGNC:17972]
OrganismFelis catus (cat)
Synonym(s)nrn
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000112sexually immature stage
474
  • 474
97.57
  • 97.57
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.13e3
  • 1.13e3
94.21
  • 94.21
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.98e3
  • 1.98e3
89.84
  • 89.84
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
2.59e3
  • 2.59e3
86.70
  • 86.70
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
5.48e3
  • 5.48e3
71.89
  • 71.89
AEIR
  • AEIR
UBERON:0008816embryonic head
  • UBERON:0000068embryo stage
6.79e3
  • 6.79e3
65.20
  • 65.20
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
8.83e3
  • 8.83e3
54.73
  • 54.73
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
9.69e3
  • 9.69e3
50.31
  • 50.31
AEIR
  • AEIR
UBERON:1000017tip of external ear
  • UBERON:0018241prime adult stage
9.84e3
  • 9.84e3
49.52
  • 49.52
AEIR
  • AEIR
UBERON:0010230eyeball of camera-type eye
  • UBERON:0000112sexually immature stage
1.36e4
  • 1.36e4
30.49
  • 30.49
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
28.80
  • 28.80
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Euteleostomi15 species16 genesCompare expression

Orthology information comes from OMA : ENSFCAG00000030503.

Cross-references

EnsemblENSFCAG00000030503 (NRN1)
HGNCHGNC:17972 (NRN1)
EMBLAANG02009320, AANG02009321
Uniprot/SPTREMBLM3X8K3, M3X8K3_FELCA

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