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F. catus Gene: TMEM17 - ENSFCAG00000030935 - Felis catus (cat)

General information

Ensembl IDENSFCAG00000030935
NameTMEM17
Descriptiontransmembrane protein 17 [Source:HGNC Symbol;Acc:HGNC:26623]
OrganismFelis catus (cat)
Synonym(s)flj34583
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
6.96e3
  • 6.96e3
64.31
  • 64.31
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000112sexually immature stage
7.09e3
  • 7.09e3
63.65
  • 63.65
AEIR
  • AEIR
UBERON:0010230eyeball of camera-type eye
  • UBERON:0000112sexually immature stage
8.06e3
  • 8.06e3
58.68
  • 58.68
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
9.14e3
  • 9.14e3
53.13
  • 53.13
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
9.26e3
  • 9.26e3
52.51
  • 52.51
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
9.45e3
  • 9.45e3
51.56
  • 51.56
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
9.49e3
  • 9.49e3
51.36
  • 51.36
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
45.16
  • 45.16
AEIR
  • AEIR
UBERON:0008816embryonic head
  • UBERON:0000068embryo stage
1.25e4
  • 1.25e4
35.69
  • 35.69
AEIR
  • AEIR
UBERON:1000017tip of external ear
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
31.85
  • 31.85
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
31.80
  • 31.80
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSFCAG00000030935.

Cross-references

EnsemblENSFCAG00000030935 (TMEM17)
HGNCHGNC:26623 (TMEM17)
EMBLAANG02061729
Uniprot/SPTREMBLM3X0Q0, M3X0Q0_FELCA

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