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F. catus Gene: PHF13 - ENSFCAG00000031114 - Felis catus (cat)

General information

Ensembl IDENSFCAG00000031114
NamePHF13
DescriptionPHD finger protein 13 [Source:HGNC Symbol;Acc:HGNC:22983]
OrganismFelis catus (cat)
Synonym(s)mgc43399
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
4.51e3
  • 4.51e3
76.88
  • 76.88
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
6.26e3
  • 6.26e3
67.90
  • 67.90
AEIR
  • AEIR
UBERON:0010230eyeball of camera-type eye
  • UBERON:0000112sexually immature stage
6.89e3
  • 6.89e3
64.67
  • 64.67
AEIR
  • AEIR
UBERON:1000017tip of external ear
  • UBERON:0018241prime adult stage
8.19e3
  • 8.19e3
58.00
  • 58.00
AEIR
  • AEIR
UBERON:0008816embryonic head
  • UBERON:0000068embryo stage
8.44e3
  • 8.44e3
56.71
  • 56.71
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
8.51e3
  • 8.51e3
56.36
  • 56.36
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
8.66e3
  • 8.66e3
55.59
  • 55.59
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000112sexually immature stage
9.32e3
  • 9.32e3
52.22
  • 52.22
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
9.51e3
  • 9.51e3
51.22
  • 51.22
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
9.62e3
  • 9.62e3
50.70
  • 50.70
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
9.91e3
  • 9.91e3
49.18
  • 49.18
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
47.08
  • 47.08
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSFCAG00000031114.

Cross-references

EnsemblENSFCAG00000031114 (PHF13)
HGNCHGNC:22983 (PHF13)
EMBLAANG02072679, AANG02072680
Uniprot/SPTREMBLM3X495, M3X495_FELCA

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