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F. catus Gene: SYT4 - ENSFCAG00000031828 - Felis catus (cat)

General information

Ensembl IDENSFCAG00000031828
NameSYT4
Descriptionsynaptotagmin 4 [Source:HGNC Symbol;Acc:HGNC:11512]
OrganismFelis catus (cat)
Synonym(s)hst1192, kiaa1342
Orthologs(s)18 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000112sexually immature stage
438
  • 438
97.76
  • 97.76
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.54e3
  • 1.54e3
92.12
  • 92.12
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
5.82e3
  • 5.82e3
70.16
  • 70.16
AEIR
  • AEIR
UBERON:0008816embryonic head
  • UBERON:0000068embryo stage
6.27e3
  • 6.27e3
67.87
  • 67.87
AEIR
  • AEIR
UBERON:0010230eyeball of camera-type eye
  • UBERON:0000112sexually immature stage
8.90e3
  • 8.90e3
54.38
  • 54.38
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
31.46
  • 31.46
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.54e4
  • 1.54e4
21.01
  • 21.01
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.66e4
  • 1.66e4
15.11
  • 15.11
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSFCAG00000031828.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSFCAG00000031828.

Cross-references

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