We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

H. sapiens Gene: PAX7 - ENSG00000009709 - Homo sapiens (human)

General information

Ensembl IDENSG00000009709
NamePAX7
Descriptionpaired box 7 [Source:HGNC Symbol;Acc:HGNC:8621]
OrganismHomo sapiens (human)
Synonym(s)e9pfv9, hup1, pax7b, q0va99, q2pjs5, rms2
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
8.63e3
  • 8.63e3
84.34
  • 84.34
AEIR
  • AEIR
UBERON:0005384nasal cavity epithelium
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
8.88e3
  • 8.88e3
  • 1.28e4
83.88
  • 83.88
  • 76.85
AEIR
  • AEIR
  • AEIR
UBERON:0001383muscle of leg
  • HsapDv:0000088human early adulthood stage (human)
1.02e4
  • 1.02e4
81.46
  • 81.46
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:000009465-79 year-old human stage (human)
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
1.04e4
  • 1.04e4
  • 1.65e4
  • 2.49e4
  • 3.12e4
  • 3.22e4
81.11
  • 81.11
  • 70.10
  • 54.73
  • 43.28
  • 41.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
78.25
  • 78.25
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • HsapDv:0000086adolescent stage (human)
  • HsapDv:0000089young adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • UBERON:0000104life cycle
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
1.31e4
  • 1.31e4
  • 1.52e4
  • 1.74e4
  • 1.90e4
  • 2.04e4
  • 2.20e4
  • 2.72e4
76.27
  • 76.27
  • 72.37
  • 68.39
  • 65.41
  • 63.05
  • 60.06
  • 50.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001388gastrocnemius
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
1.39e4
  • 1.39e4
  • 1.44e4
  • 1.45e4
  • 1.46e4
  • 1.48e4
  • 1.89e4
74.80
  • 74.80
  • 73.84
  • 73.71
  • 73.43
  • 73.13
  • 65.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009835anterior cingulate cortex
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
1.48e4
  • 1.48e4
  • 1.92e4
  • 2.24e4
  • 2.30e4
  • 2.35e4
73.19
  • 73.19
  • 65.13
  • 59.42
  • 58.32
  • 57.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • HsapDv:000009580 year-old and over human stage (human)
  • UBERON:0034920infant stage
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000104life cycle
  • HsapDv:0000089young adult stage (human)
1.53e4
  • 1.53e4
  • 1.73e4
  • 2.03e4
  • 2.08e4
  • 2.17e4
  • 2.36e4
  • 3.22e4
  • 3.22e4
72.21
  • 72.21
  • 68.56
  • 63.18
  • 62.27
  • 60.66
  • 57.18
  • 41.61
  • 41.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • HsapDv:0000199fifth LMP month human stage (human)
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
  • 3.21e4
71.45
  • 71.45
  • 41.78
AEIR
  • AEIR
  • AEIR
UBERON:0002810right frontal lobe
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
1.63e4
  • 1.63e4
  • 1.64e4
  • 1.98e4
  • 2.07e4
  • 2.34e4
70.44
  • 70.44
  • 70.26
  • 64.05
  • 62.38
  • 57.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013540Brodmann (1909) area 9
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009580 year-old and over human stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
1.71e4
  • 1.71e4
  • 1.84e4
  • 2.08e4
  • 2.10e4
68.90
  • 68.90
  • 66.64
  • 62.22
  • 61.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000089young adult stage (human)
  • HsapDv:000009580 year-old and over human stage (human)
1.77e4
  • 1.77e4
  • 1.85e4
  • 1.97e4
  • 2.01e4
  • 2.13e4
  • 2.38e4
  • 2.86e4
  • 3.24e4
67.82
  • 67.82
  • 66.48
  • 64.21
  • 63.50
  • 61.38
  • 56.86
  • 48.16
  • 41.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
1.81e4
  • 1.81e4
  • 3.12e4
  • 3.13e4
67.05
  • 67.05
  • 43.37
  • 43.13
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0018303adrenal tissue
  • HsapDv:0000197third LMP month human stage (human)
1.93e4
  • 1.93e4
64.96
  • 64.96
AEIR
  • AEIR
UBERON:0000955brain
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
  • UBERON:0007220late embryonic stage
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000089young adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009580 year-old and over human stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
1.95e4
  • 1.95e4
  • 2.68e4
  • 2.69e4
  • 2.74e4
  • 3.07e4
  • 3.11e4
  • 3.11e4
  • 3.18e4
64.64
  • 64.64
  • 51.40
  • 51.09
  • 50.25
  • 44.29
  • 43.62
  • 43.47
  • 42.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • HsapDv:0000197third LMP month human stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000089young adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
1.99e4
  • 1.99e4
  • 2.70e4
  • 3.04e4
  • 3.21e4
  • 3.22e4
  • 3.23e4
63.96
  • 63.96
  • 51.02
  • 44.78
  • 41.63
  • 41.45
  • 41.44
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006469C1 segment of cervical spinal cord
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.13e4
  • 2.13e4
  • 2.30e4
  • 2.32e4
  • 2.43e4
  • 2.49e4
61.24
  • 61.24
  • 58.33
  • 57.94
  • 55.88
  • 54.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001507biceps brachii
  • HsapDv:0000086adolescent stage (human)
  • UBERON:0000113post-juvenile adult stage
2.14e4
  • 2.14e4
  • 3.09e4
61.06
  • 61.06
  • 43.81
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007220late embryonic stage
  • UBERON:0000104life cycle
2.25e4
  • 2.25e4
  • 3.22e4
59.15
  • 59.15
  • 41.52
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0000104life cycle
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
2.26e4
  • 2.26e4
  • 3.63e4
  • 3.76e4
  • 3.86e4
59.01
  • 59.01
  • 34.02
  • 31.81
  • 29.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
2.27e4
  • 2.27e4
  • 2.37e4
  • 2.70e4
  • 2.81e4
  • 2.81e4
58.83
  • 58.83
  • 56.99
  • 50.90
  • 48.91
  • 48.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002196adenohypophysis
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.27e4
  • 2.27e4
  • 3.07e4
  • 3.40e4
58.70
  • 58.70
  • 44.23
  • 38.34
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000104life cycle
2.37e4
  • 2.37e4
  • 3.22e4
  • 3.23e4
  • 3.92e4
56.97
  • 56.97
  • 41.52
  • 41.39
  • 28.91
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
2.38e4
  • 2.38e4
  • 2.44e4
  • 2.61e4
  • 2.68e4
  • 2.71e4
56.80
  • 56.80
  • 55.65
  • 52.59
  • 51.39
  • 50.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0000104life cycle
2.40e4
  • 2.40e4
56.35
  • 56.35
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:000009580 year-old and over human stage (human)
2.51e4
  • 2.51e4
  • 2.68e4
  • 2.77e4
  • 2.98e4
  • 2.99e4
  • 3.16e4
54.37
  • 54.37
  • 51.36
  • 49.72
  • 45.89
  • 45.76
  • 42.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002038substantia nigra
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
2.51e4
  • 2.51e4
  • 2.56e4
  • 2.61e4
  • 2.62e4
  • 3.02e4
54.34
  • 54.34
  • 53.52
  • 52.54
  • 52.35
  • 45.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001873caudate nucleus
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • UBERON:0000104life cycle
2.63e4
  • 2.63e4
  • 2.71e4
  • 2.81e4
  • 3.08e4
52.18
  • 52.18
  • 50.85
  • 48.92
  • 44.03
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000043tendon
  • HsapDv:0000092human middle aged stage (human)
2.68e4
  • 2.68e4
51.31
  • 51.31
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000111organogenesis stage
  • UBERON:0000104life cycle
2.82e4
  • 2.82e4
  • 3.05e4
48.77
  • 48.77
  • 44.64
AEIR
  • AEIR
  • AEIR
UBERON:0005030mucosa of paranasal sinus
  • UBERON:0034919juvenile stage
2.91e4
  • 2.91e4
47.09
  • 47.09
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.96e4
  • 2.96e4
  • 4.20e4
46.18
  • 46.18
  • 23.68
AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
3.03e4
  • 3.03e4
44.90
  • 44.90
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000091human late adulthood stage (human)
3.05e4
  • 3.05e4
  • 4.02e4
  • 4.22e4
  • 4.28e4
  • 4.42e4
44.70
  • 44.70
  • 27.03
  • 23.46
  • 22.23
  • 19.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001890forebrain
  • HsapDv:0000199fifth LMP month human stage (human)
3.16e4
  • 3.16e4
42.57
  • 42.57
AEIR
  • AEIR
UBERON:0003729mouth mucosa
  • UBERON:0000104life cycle
3.17e4
  • 3.17e4
42.39
  • 42.39
AEIR
  • AEIR
UBERON:0002367prostate gland
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
3.19e4
  • 3.19e4
  • 3.72e4
  • 3.81e4
  • 3.99e4
  • 4.58e4
41.99
  • 41.99
  • 32.44
  • 30.80
  • 27.51
  • 16.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0000104life cycle
3.21e4
  • 3.21e4
41.76
  • 41.76
AEIR
  • AEIR
UBERON:0002245cerebellar hemisphere
  • UBERON:0000104life cycle
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.22e4
  • 3.22e4
  • 4.01e4
  • 4.22e4
  • 4.26e4
41.52
  • 41.52
  • 27.16
  • 23.45
  • 22.59
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.22e4
  • 3.22e4
  • 3.23e4
  • 3.85e4
41.51
  • 41.51
  • 41.33
  • 30.10
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
3.48e4
  • 3.48e4
  • 4.55e4
  • 4.55e4
36.88
  • 36.88
  • 17.45
  • 17.43
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001511skin of leg
  • HsapDv:0000087human adult stage (human)
3.53e4
  • 3.53e4
35.99
  • 35.99
AEIR
  • AEIR
UBERON:0001830minor salivary gland
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.64e4
  • 3.64e4
  • 4.06e4
33.98
  • 33.98
  • 26.31
AEIR
  • AEIR
  • AEIR
UBERON:0035833lower esophagus muscularis layer
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
4.02e4
  • 4.02e4
  • 4.05e4
  • 4.14e4
26.93
  • 26.93
  • 26.39
  • 24.77
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001496ascending aorta
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
4.03e4
  • 4.03e4
  • 4.18e4
  • 4.21e4
26.76
  • 26.76
  • 24.15
  • 23.63
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0014890right hemisphere of cerebellum
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
4.12e4
  • 4.12e4
  • 4.23e4
  • 4.43e4
25.17
  • 25.17
  • 23.16
  • 19.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001120left lobe of thyroid gland
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
4.23e4
  • 4.23e4
  • 4.33e4
  • 4.36e4
23.14
  • 23.14
  • 21.47
  • 20.86
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Amniota12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression
Euteleostomi14 species15 genesCompare expression

Orthology information comes from OMA : ENSG00000009709.

Cross-references

CCDSCCDS186 (CCDS186.1), CCDS44074 (CCDS44074.1), CCDS44075 (CCDS44075.1)
EnsemblENSG00000009709 (PAX7)
HGNCHGNC:8621 (PAX7)
EMBLAL021528, BC121165, BC121166, CH471134, DQ322591, X15042, X15250, X15251, X96743, X96744, X96745, X96746, X96747, X96748, Z35141
OncoMXPAX7 (PAX7)
Uniprot/SWISSPROTP23759, PAX7_HUMAN

Do not show this banner again