H. sapiens Gene: CHAT - ENSG00000070748 - Homo sapiens (human)

General information

Ensembl IDENSG00000070748
NameCHAT
Descriptioncholine O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:1912]
OrganismHomo sapiens (human)
Synonym(s)a2bdf4, a2bdf5, choactase, cms1a, cms1a2, cms6, q16488, q9bq23, q9bq35, q9bqe1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001987placenta
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000068embryo stage
  • UBERON:0007220late embryonic stage
  • UBERON:0000111organogenesis stage
  • UBERON:0000104life cycle
1.56e4
  • 1.56e4
  • 2.09e4
  • 2.41e4
  • 2.44e4
  • 2.59e4
  • 3.20e4
71.58
  • 71.58
  • 62.12
  • 56.24
  • 55.75
  • 52.89
  • 41.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001874putamen
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000104life cycle
1.69e4
  • 1.69e4
  • 1.86e4
  • 1.88e4
  • 2.06e4
  • 2.77e4
  • 3.24e4
69.28
  • 69.28
  • 66.15
  • 65.84
  • 62.56
  • 49.73
  • 41.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001873caudate nucleus
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000104life cycle
1.72e4
  • 1.72e4
  • 1.85e4
  • 2.05e4
  • 2.08e4
  • 2.33e4
  • 2.40e4
  • 3.24e4
68.74
  • 68.74
  • 66.41
  • 62.85
  • 62.23
  • 57.76
  • 56.50
  • 41.21
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001882nucleus accumbens
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • UBERON:0000104life cycle
1.94e4
  • 1.94e4
  • 2.07e4
  • 2.30e4
  • 2.33e4
  • 2.47e4
  • 3.25e4
64.84
  • 64.84
  • 62.38
  • 58.15
  • 57.72
  • 55.21
  • 40.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.00e4
  • 2.00e4
  • 3.23e4
63.66
  • 63.66
  • 41.27
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000104life cycle
  • HsapDv:0000199fifth LMP month human stage (human)
2.00e4
  • 2.00e4
  • 2.85e4
63.59
  • 63.59
  • 48.23
AEIR
  • AEIR
  • AEIR
UBERON:0004991mucosa of transverse colon
  • HsapDv:000009025-44 year-old human stage (human)
2.20e4
  • 2.20e4
60.03
  • 60.03
AEIR
  • AEIR
UBERON:0002048lung
  • HsapDv:0000089young adult stage (human)
  • UBERON:0000104life cycle
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000113post-juvenile adult stage
2.23e4
  • 2.23e4
  • 3.16e4
  • 3.72e4
  • 4.07e4
59.41
  • 59.41
  • 42.70
  • 32.46
  • 26.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.28e4
  • 2.28e4
  • 2.62e4
  • 3.33e4
58.61
  • 58.61
  • 52.45
  • 39.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001157transverse colon
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.38e4
  • 2.38e4
  • 2.47e4
  • 2.50e4
  • 2.66e4
  • 2.69e4
56.85
  • 56.85
  • 55.22
  • 54.61
  • 51.71
  • 51.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001154vermiform appendix
  • UBERON:0000113post-juvenile adult stage
2.43e4
  • 2.43e4
55.96
  • 55.96
AEIR
  • AEIR
UBERON:0005343cortical plate
  • HsapDv:0000199fifth LMP month human stage (human)
2.49e4
  • 2.49e4
54.84
  • 54.84
AEIR
  • AEIR
PBA:294022000subventricular zone (inner) (primate)
  • HsapDv:0000199fifth LMP month human stage (human)
2.52e4
  • 2.52e4
54.18
  • 54.18
AEIR
  • AEIR
UBERON:0003454small intestine Peyer's patch
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
2.55e4
  • 2.55e4
  • 2.58e4
  • 2.64e4
  • 2.71e4
  • 2.82e4
53.69
  • 53.69
  • 53.23
  • 52.04
  • 50.75
  • 48.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0035805muscle layer of sigmoid colon
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.60e4
  • 2.60e4
  • 2.67e4
  • 2.74e4
  • 2.75e4
  • 3.05e4
52.81
  • 52.81
  • 51.49
  • 50.22
  • 50.00
  • 44.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000113post-juvenile adult stage
2.60e4
  • 2.60e4
  • 2.98e4
  • 3.06e4
52.75
  • 52.75
  • 45.90
  • 44.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • HsapDv:0000087human adult stage (human)
  • UBERON:0007220late embryonic stage
  • HsapDv:0000199fifth LMP month human stage (human)
  • UBERON:0000104life cycle
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000113post-juvenile adult stage
2.63e4
  • 2.63e4
  • 2.65e4
  • 2.89e4
  • 3.22e4
  • 3.44e4
  • 3.78e4
52.25
  • 52.25
  • 51.81
  • 47.45
  • 41.52
  • 37.46
  • 31.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
2.75e4
  • 2.75e4
  • 3.38e4
  • 3.86e4
  • 4.19e4
  • 4.22e4
50.09
  • 50.09
  • 38.62
  • 29.94
  • 23.90
  • 23.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • HsapDv:0000092human middle aged stage (human)
2.89e4
  • 2.89e4
  • 3.19e4
  • 3.59e4
  • 3.65e4
47.53
  • 47.53
  • 42.15
  • 34.76
  • 33.74
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000006islet of Langerhans
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.92e4
  • 2.92e4
  • 3.55e4
46.98
  • 46.98
  • 35.49
AEIR
  • AEIR
  • AEIR
UBERON:0001160fundus of stomach
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
2.93e4
  • 2.93e4
  • 3.38e4
46.86
  • 46.86
  • 38.61
AEIR
  • AEIR
  • AEIR
UBERON:0006469C1 segment of cervical spinal cord
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.02e4
  • 3.02e4
  • 3.40e4
  • 3.47e4
45.18
  • 45.18
  • 38.34
  • 36.90
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009580 year-old and over human stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0007220late embryonic stage
  • UBERON:0000104life cycle
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
3.10e4
  • 3.10e4
  • 3.11e4
  • 3.18e4
  • 3.21e4
  • 3.58e4
  • 3.95e4
  • 4.03e4
43.62
  • 43.62
  • 43.46
  • 42.23
  • 41.78
  • 34.92
  • 28.23
  • 26.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • HsapDv:0000197third LMP month human stage (human)
  • UBERON:0000113post-juvenile adult stage
3.10e4
  • 3.10e4
  • 3.98e4
43.61
  • 43.61
  • 27.75
AEIR
  • AEIR
  • AEIR
CL:0000576monocyte
  • UBERON:0000113post-juvenile adult stage
3.15e4
  • 3.15e4
42.74
  • 42.74
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000113post-juvenile adult stage
3.18e4
  • 3.18e4
42.18
  • 42.18
AEIR
  • AEIR
UBERON:0001296myometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.19e4
  • 3.19e4
  • 3.21e4
  • 3.82e4
  • 4.41e4
42.00
  • 42.00
  • 41.69
  • 30.70
  • 19.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001150body of pancreas
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.20e4
  • 3.20e4
  • 3.26e4
  • 3.65e4
  • 3.81e4
  • 3.83e4
41.81
  • 41.81
  • 40.80
  • 33.76
  • 30.87
  • 30.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0000104life cycle
3.21e4
  • 3.21e4
41.76
  • 41.76
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
3.22e4
  • 3.22e4
  • 4.66e4
41.60
  • 41.60
  • 15.31
AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.23e4
  • 3.23e4
  • 3.53e4
41.26
  • 41.26
  • 35.91
AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • HsapDv:0000092human middle aged stage (human)
3.24e4
  • 3.24e4
41.20
  • 41.20
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • HsapDv:000009580 year-old and over human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.24e4
  • 3.24e4
  • 4.19e4
  • 4.25e4
41.11
  • 41.11
  • 23.88
  • 22.77
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
3.32e4
  • 3.32e4
39.78
  • 39.78
AEIR
  • AEIR
UBERON:0002038substantia nigra
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.32e4
  • 3.32e4
  • 3.44e4
  • 3.69e4
39.74
  • 39.74
  • 37.60
  • 32.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0035841esophagogastric junction muscularis propria
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
3.41e4
  • 3.41e4
  • 3.51e4
  • 3.56e4
37.98
  • 37.98
  • 36.20
  • 35.43
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001161body of stomach
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.53e4
  • 3.53e4
  • 3.57e4
  • 3.82e4
  • 3.94e4
35.92
  • 35.92
  • 35.13
  • 30.61
  • 28.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004533left testis
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.53e4
  • 3.53e4
  • 3.54e4
  • 3.56e4
35.83
  • 35.83
  • 35.67
  • 35.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • HsapDv:0000086adolescent stage (human)
  • UBERON:0000104life cycle
3.65e4
  • 3.65e4
  • 3.82e4
33.80
  • 33.80
  • 30.54
AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
3.69e4
  • 3.69e4
32.90
  • 32.90
AEIR
  • AEIR
UBERON:0035833lower esophagus muscularis layer
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.74e4
  • 3.74e4
  • 3.74e4
32.00
  • 32.00
  • 32.00
AEIR
  • AEIR
  • AEIR
UBERON:0009835anterior cingulate cortex
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.81e4
  • 3.81e4
  • 4.07e4
30.84
  • 30.84
  • 26.02
AEIR
  • AEIR
  • AEIR
UBERON:0001876amygdala
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.85e4
  • 3.85e4
  • 4.64e4
30.09
  • 30.09
  • 15.78
AEIR
  • AEIR
  • AEIR
UBERON:0001515thoracic aorta
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
4.18e4
  • 4.18e4
  • 4.53e4
24.00
  • 24.00
  • 17.74
AEIR
  • AEIR
  • AEIR
UBERON:0013540Brodmann (1909) area 9
  • HsapDv:000009580 year-old and over human stage (human)
4.21e4
  • 4.21e4
23.49
  • 23.49
AEIR
  • AEIR
UBERON:0002810right frontal lobe
  • HsapDv:0000087human adult stage (human)
4.21e4
  • 4.21e4
23.47
  • 23.47
AEIR
  • AEIR
UBERON:0000996vagina
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.26e4
  • 4.26e4
  • 4.48e4
22.69
  • 22.69
  • 18.67
AEIR
  • AEIR
  • AEIR
UBERON:0001496ascending aorta
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.34e4
  • 4.34e4
  • 4.35e4
  • 4.45e4
21.09
  • 21.09
  • 20.96
  • 19.18
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002469esophagus mucosa
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
4.35e4
  • 4.35e4
  • 4.37e4
  • 4.41e4
21.04
  • 21.04
  • 20.65
  • 19.88
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007610tibial artery
  • HsapDv:0000087human adult stage (human)
4.42e4
  • 4.42e4
19.66
  • 19.66
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

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