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H. sapiens Gene: TRPC5 - ENSG00000072315 - Homo sapiens (human)

General information

Ensembl IDENSG00000072315
NameTRPC5
Descriptiontransient receptor potential cation channel, subfamily C, member 5 [Source:HGNC Symbol;Acc:HGNC:12337]
OrganismHomo sapiens (human)
Synonym(s)b2rp53, o75233, ppp1r159, q5jxy8, q9y514, trp5
Orthologs(s)20 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005343cortical plate
  • HsapDv:0000199fifth LMP month human stage (human)
  • HsapDv:0000198fourth LMP month human stage (human)
1.10e4
  • 1.10e4
  • 1.52e4
80.07
  • 80.07
  • 72.32
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • HsapDv:0000086adolescent stage (human)
  • HsapDv:0000089young adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000104life cycle
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
1.48e4
  • 1.48e4
  • 1.56e4
  • 1.63e4
  • 2.11e4
  • 2.23e4
  • 2.49e4
  • 2.77e4
73.08
  • 73.08
  • 71.63
  • 70.39
  • 61.66
  • 59.58
  • 54.74
  • 49.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • HsapDv:0000087human adult stage (human)
  • UBERON:0034920infant stage
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000104life cycle
  • HsapDv:0000089young adult stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
1.66e4
  • 1.66e4
  • 1.68e4
  • 2.79e4
  • 2.96e4
  • 3.22e4
  • 3.22e4
  • 3.26e4
69.87
  • 69.87
  • 69.59
  • 49.40
  • 46.17
  • 41.61
  • 41.58
  • 40.83
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
1.67e4
  • 1.67e4
69.74
  • 69.74
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • HsapDv:00000842-5 year-old child stage (human)
  • HsapDv:0000086adolescent stage (human)
1.90e4
  • 1.90e4
  • 2.79e4
65.56
  • 65.56
  • 49.30
AEIR
  • AEIR
  • AEIR
UBERON:0009835anterior cingulate cortex
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
1.96e4
  • 1.96e4
  • 2.20e4
  • 2.36e4
  • 2.42e4
  • 2.52e4
  • 2.65e4
64.33
  • 64.33
  • 60.03
  • 57.23
  • 56.09
  • 54.32
  • 51.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000089young adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000104life cycle
1.97e4
  • 1.97e4
  • 2.31e4
  • 2.38e4
  • 2.45e4
  • 2.75e4
  • 2.80e4
64.16
  • 64.16
  • 58.04
  • 56.76
  • 55.46
  • 50.00
  • 49.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000089young adult stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • UBERON:0034920infant stage
  • HsapDv:000009580 year-old and over human stage (human)
2.04e4
  • 2.04e4
  • 2.21e4
  • 2.39e4
  • 2.43e4
  • 2.58e4
  • 2.75e4
  • 2.75e4
  • 3.19e4
  • 3.24e4
63.01
  • 63.01
  • 59.82
  • 56.64
  • 55.85
  • 53.25
  • 50.14
  • 49.99
  • 42.13
  • 41.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
2.10e4
  • 2.10e4
61.85
  • 61.85
AEIR
  • AEIR
UBERON:0002810right frontal lobe
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
2.12e4
  • 2.12e4
  • 2.20e4
  • 2.50e4
  • 2.69e4
  • 2.75e4
61.53
  • 61.53
  • 60.07
  • 54.69
  • 51.13
  • 50.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013540Brodmann (1909) area 9
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:000009580 year-old and over human stage (human)
2.15e4
  • 2.15e4
  • 2.18e4
  • 2.48e4
  • 2.63e4
61.05
  • 61.05
  • 60.42
  • 54.88
  • 52.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
2.25e4
  • 2.25e4
  • 2.31e4
  • 2.49e4
  • 2.50e4
  • 2.82e4
59.09
  • 59.09
  • 57.99
  • 54.81
  • 54.52
  • 48.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
2.26e4
  • 2.26e4
58.96
  • 58.96
AEIR
  • AEIR
UBERON:0001199mucosa of stomach
  • HsapDv:0000091human late adulthood stage (human)
2.27e4
  • 2.27e4
58.73
  • 58.73
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • HsapDv:0000089young adult stage (human)
2.38e4
  • 2.38e4
56.82
  • 56.82
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
2.45e4
  • 2.45e4
  • 2.50e4
  • 2.53e4
55.60
  • 55.60
  • 54.60
  • 54.12
AEIR
  • AEIR
  • AEIR
  • AEIR
PBA:294022000subventricular zone (inner) (primate)
  • HsapDv:0000199fifth LMP month human stage (human)
2.50e4
  • 2.50e4
54.56
  • 54.56
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
2.61e4
  • 2.61e4
  • 2.79e4
  • 2.80e4
  • 3.07e4
52.70
  • 52.70
  • 49.37
  • 49.20
  • 44.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002038substantia nigra
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
2.74e4
  • 2.74e4
  • 2.77e4
  • 3.04e4
50.34
  • 50.34
  • 49.77
  • 44.89
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000113post-juvenile adult stage
2.75e4
  • 2.75e4
  • 2.76e4
  • 3.08e4
50.05
  • 50.05
  • 49.88
  • 44.15
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001882nucleus accumbens
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000104life cycle
  • HsapDv:0000091human late adulthood stage (human)
2.86e4
  • 2.86e4
  • 3.17e4
  • 3.25e4
  • 3.26e4
48.06
  • 48.06
  • 42.46
  • 40.97
  • 40.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0035841esophagogastric junction muscularis propria
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.91e4
  • 2.91e4
  • 2.94e4
  • 3.03e4
  • 3.10e4
  • 3.12e4
47.09
  • 47.09
  • 46.68
  • 44.94
  • 43.71
  • 43.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
2.95e4
  • 2.95e4
  • 3.09e4
  • 3.79e4
46.49
  • 46.49
  • 43.94
  • 31.17
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001874putamen
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • UBERON:0000104life cycle
2.96e4
  • 2.96e4
  • 3.19e4
  • 3.24e4
46.19
  • 46.19
  • 42.11
  • 41.11
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
3.00e4
  • 3.00e4
  • 3.06e4
45.45
  • 45.45
  • 44.45
AEIR
  • AEIR
  • AEIR
UBERON:0002477medial globus pallidus
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
3.06e4
  • 3.06e4
  • 3.24e4
44.39
  • 44.39
  • 41.09
AEIR
  • AEIR
  • AEIR
UBERON:0001873caudate nucleus
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • UBERON:0000104life cycle
3.13e4
  • 3.13e4
  • 3.17e4
  • 3.20e4
  • 3.24e4
43.24
  • 43.24
  • 42.36
  • 41.89
  • 41.21
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013473lower esophagus
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.15e4
  • 3.15e4
  • 4.54e4
42.81
  • 42.81
  • 17.57
AEIR
  • AEIR
  • AEIR
UBERON:0035833lower esophagus muscularis layer
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.38e4
  • 3.38e4
  • 3.49e4
  • 3.60e4
38.59
  • 38.59
  • 36.54
  • 34.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001119right lobe of thyroid gland
  • HsapDv:0000087human adult stage (human)
3.43e4
  • 3.43e4
37.68
  • 37.68
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species20 genesCompare expression

Orthology information comes from OMA : ENSG00000072315.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata5 genesCompare expression

Paralogy information comes from OMA : ENSG00000072315.

Cross-references

CCDSCCDS14561 (CCDS14561.1)
EnsemblENSG00000072315 (TRPC5)
HGNCHGNC:12337 (TRPC5)
EMBLAC005191, AF054568, AL049563, BC137271, BC137274, CH471120
OncoMXTRPC5 (TRPC5)
Uniprot/SWISSPROTQ9UL62, TRPC5_HUMAN

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