H. sapiens Gene: VSX1 - ENSG00000100987 - Homo sapiens (human)

General information

Ensembl IDENSG00000100987
NameVSX1
Descriptionvisual system homeobox 1 [Source:HGNC Symbol;Acc:HGNC:12723]
OrganismHomo sapiens (human)
Synonym(s)b9egj4, caasds, d1mf28, ktcn, ktcn1, ppcd, ppcd1, ppd, q0gm60, q0gm61, q0gm62, q0gm63, q0gm64, q0gm65, q5tf40, q5tf41, q9hcu3, q9nu27, rinx
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0014890right hemisphere of cerebellum
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
4.87e3
  • 4.87e3
  • 5.13e3
  • 5.94e3
  • 6.20e3
  • 6.40e3
  • 6.78e3
91.16
  • 91.16
  • 90.68
  • 89.21
  • 88.75
  • 88.37
  • 87.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002245cerebellar hemisphere
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • UBERON:0000104life cycle
4.87e3
  • 4.87e3
  • 5.17e3
  • 5.29e3
  • 5.39e3
  • 5.68e3
  • 7.06e3
  • 2.08e4
91.16
  • 91.16
  • 90.61
  • 90.39
  • 90.21
  • 89.69
  • 87.18
  • 62.19
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • HsapDv:000009465-79 year-old human stage (human)
  • UBERON:0000104life cycle
  • HsapDv:000009580 year-old and over human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000089young adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
5.71e3
  • 5.71e3
  • 1.25e4
  • 1.32e4
  • 1.47e4
  • 1.88e4
  • 2.01e4
  • 2.07e4
89.63
  • 89.63
  • 77.30
  • 75.96
  • 73.39
  • 65.88
  • 63.49
  • 62.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002196adenohypophysis
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
1.15e4
  • 1.15e4
  • 1.28e4
  • 1.29e4
  • 1.38e4
79.04
  • 79.04
  • 76.77
  • 76.63
  • 74.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:000009580 year-old and over human stage (human)
1.23e4
  • 1.23e4
  • 1.30e4
  • 1.33e4
  • 1.33e4
  • 1.53e4
  • 1.89e4
  • 2.12e4
77.75
  • 77.75
  • 76.44
  • 75.91
  • 75.82
  • 72.16
  • 65.60
  • 61.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001876amygdala
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
1.28e4
  • 1.28e4
  • 1.32e4
  • 1.37e4
  • 1.39e4
  • 2.01e4
76.68
  • 76.68
  • 75.95
  • 75.11
  • 74.85
  • 63.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006469C1 segment of cervical spinal cord
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
1.32e4
  • 1.32e4
  • 1.49e4
  • 1.54e4
  • 1.55e4
  • 1.60e4
  • 1.68e4
76.04
  • 76.04
  • 72.99
  • 71.98
  • 71.84
  • 70.88
  • 69.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002038substantia nigra
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
1.33e4
  • 1.33e4
  • 1.44e4
  • 1.47e4
  • 1.87e4
  • 1.96e4
  • 2.07e4
75.77
  • 75.77
  • 73.89
  • 73.38
  • 66.14
  • 64.47
  • 62.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
1.34e4
  • 1.34e4
  • 1.39e4
  • 1.45e4
  • 1.53e4
  • 2.08e4
75.67
  • 75.67
  • 74.72
  • 73.62
  • 72.23
  • 62.15
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
1.38e4
  • 1.38e4
  • 1.44e4
  • 1.83e4
  • 2.31e4
  • 2.36e4
75.00
  • 75.00
  • 73.92
  • 66.83
  • 58.11
  • 57.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009835anterior cingulate cortex
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
1.40e4
  • 1.40e4
  • 1.43e4
  • 1.46e4
  • 1.55e4
  • 1.91e4
  • 2.09e4
74.60
  • 74.60
  • 74.00
  • 73.54
  • 71.80
  • 65.25
  • 62.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0002336buccal mucosa cell
  • HsapDv:000009025-44 year-old human stage (human)
1.42e4
  • 1.42e4
74.23
  • 74.23
AEIR
  • AEIR
UBERON:0001882nucleus accumbens
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
  • 1.49e4
  • 1.54e4
  • 1.54e4
  • 1.57e4
  • 2.04e4
  • 2.36e4
73.86
  • 73.86
  • 73.04
  • 72.05
  • 72.03
  • 71.45
  • 62.90
  • 57.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:000009580 year-old and over human stage (human)
  • UBERON:0007220late embryonic stage
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000089young adult stage (human)
1.44e4
  • 1.44e4
  • 1.92e4
  • 2.01e4
  • 2.32e4
  • 2.35e4
  • 2.56e4
  • 2.60e4
  • 3.07e4
73.76
  • 73.76
  • 65.13
  • 63.56
  • 57.81
  • 57.39
  • 53.47
  • 52.88
  • 44.29
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000089young adult stage (human)
  • UBERON:0000104life cycle
  • HsapDv:0000086adolescent stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
1.45e4
  • 1.45e4
  • 1.53e4
  • 1.54e4
  • 1.71e4
  • 1.83e4
  • 2.08e4
  • 2.52e4
73.65
  • 73.65
  • 72.15
  • 72.05
  • 68.95
  • 66.71
  • 62.22
  • 54.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002810right frontal lobe
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
1.47e4
  • 1.47e4
  • 1.55e4
  • 1.74e4
  • 1.78e4
  • 1.86e4
73.37
  • 73.37
  • 71.92
  • 68.48
  • 67.64
  • 66.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013540Brodmann (1909) area 9
  • HsapDv:000009580 year-old and over human stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
1.49e4
  • 1.49e4
  • 1.49e4
  • 1.67e4
  • 1.74e4
72.98
  • 72.98
  • 72.86
  • 69.66
  • 68.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000089young adult stage (human)
  • HsapDv:000009580 year-old and over human stage (human)
1.51e4
  • 1.51e4
  • 1.51e4
  • 1.52e4
  • 1.68e4
  • 1.80e4
  • 2.04e4
  • 2.90e4
  • 3.24e4
72.63
  • 72.63
  • 72.61
  • 72.43
  • 69.41
  • 67.36
  • 62.89
  • 47.28
  • 41.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001874putamen
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
  • 1.56e4
  • 1.65e4
  • 1.67e4
  • 2.06e4
  • 2.38e4
72.50
  • 72.50
  • 71.76
  • 70.10
  • 69.59
  • 62.65
  • 56.72
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001873caudate nucleus
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • UBERON:0000104life cycle
  • HsapDv:000009025-44 year-old human stage (human)
1.54e4
  • 1.54e4
  • 1.56e4
  • 1.64e4
  • 1.68e4
  • 1.96e4
  • 2.21e4
  • 2.34e4
72.13
  • 72.13
  • 71.70
  • 70.19
  • 69.50
  • 64.39
  • 59.96
  • 57.46
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002118right ovary
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
1.61e4
  • 1.61e4
  • 2.40e4
  • 2.51e4
  • 2.56e4
70.77
  • 70.77
  • 56.48
  • 54.50
  • 53.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000198fourth LMP month human stage (human)
1.61e4
  • 1.61e4
  • 2.59e4
  • 2.71e4
  • 3.17e4
70.74
  • 70.74
  • 53.04
  • 50.80
  • 42.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0034920infant stage
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009580 year-old and over human stage (human)
  • UBERON:0000104life cycle
  • HsapDv:0000089young adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
1.65e4
  • 1.65e4
  • 2.18e4
  • 2.30e4
  • 2.34e4
  • 2.35e4
  • 2.37e4
  • 2.39e4
  • 3.26e4
69.97
  • 69.97
  • 60.44
  • 58.29
  • 57.47
  • 57.35
  • 56.97
  • 56.58
  • 40.83
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.71e4
  • 1.71e4
69.01
  • 69.01
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000089young adult stage (human)
  • HsapDv:0000198fourth LMP month human stage (human)
1.75e4
  • 1.75e4
  • 2.29e4
  • 2.32e4
  • 2.33e4
  • 2.44e4
68.20
  • 68.20
  • 58.41
  • 57.87
  • 57.64
  • 55.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.76e4
  • 1.76e4
  • 2.13e4
  • 2.43e4
68.08
  • 68.08
  • 61.26
  • 55.88
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
1.79e4
  • 1.79e4
  • 2.94e4
  • 3.58e4
67.45
  • 67.45
  • 46.53
  • 35.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
1.83e4
  • 1.83e4
  • 2.03e4
  • 2.54e4
  • 2.60e4
  • 3.03e4
66.77
  • 66.77
  • 63.16
  • 53.80
  • 52.71
  • 45.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
1.84e4
  • 1.84e4
66.60
  • 66.60
AEIR
  • AEIR
UBERON:0009853body of uterus
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
1.91e4
  • 1.91e4
  • 2.78e4
  • 3.24e4
65.24
  • 65.24
  • 49.45
  • 41.09
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001388gastrocnemius
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
  • HsapDv:0000093human aged stage
  • HsapDv:000009025-44 year-old human stage (human)
1.92e4
  • 1.92e4
  • 1.97e4
  • 1.99e4
  • 2.00e4
  • 2.01e4
  • 2.16e4
  • 2.29e4
  • 2.36e4
65.09
  • 65.09
  • 64.20
  • 63.81
  • 63.63
  • 63.57
  • 60.85
  • 58.36
  • 57.18
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002336corpus callosum
  • HsapDv:0000089young adult stage (human)
  • HsapDv:0000086adolescent stage (human)
1.96e4
  • 1.96e4
  • 2.04e4
64.38
  • 64.38
  • 62.98
AEIR
  • AEIR
  • AEIR
UBERON:0006631right atrium auricular region
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.03e4
  • 2.03e4
  • 2.09e4
  • 2.31e4
  • 2.32e4
  • 2.40e4
  • 2.45e4
63.06
  • 63.06
  • 62.07
  • 58.02
  • 57.84
  • 56.50
  • 55.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000043tendon
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
2.04e4
  • 2.04e4
  • 2.13e4
62.89
  • 62.89
  • 61.39
AEIR
  • AEIR
  • AEIR
UBERON:0002367prostate gland
  • HsapDv:000009465-79 year-old human stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000104life cycle
2.09e4
  • 2.09e4
  • 2.44e4
  • 2.65e4
  • 2.81e4
  • 2.92e4
  • 2.96e4
62.13
  • 62.13
  • 55.67
  • 51.79
  • 48.92
  • 46.90
  • 46.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
2.10e4
  • 2.10e4
61.96
  • 61.96
AEIR
  • AEIR
UBERON:0001155colon
  • HsapDv:000009465-79 year-old human stage (human)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:000009025-44 year-old human stage (human)
2.11e4
  • 2.11e4
  • 2.51e4
  • 3.03e4
  • 3.24e4
61.60
  • 61.60
  • 54.39
  • 44.93
  • 41.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001199mucosa of stomach
  • HsapDv:0000091human late adulthood stage (human)
2.12e4
  • 2.12e4
61.55
  • 61.55
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
2.14e4
  • 2.14e4
  • 2.42e4
  • 2.45e4
  • 2.49e4
  • 2.72e4
  • 2.80e4
61.08
  • 61.08
  • 56.08
  • 55.49
  • 54.73
  • 50.58
  • 49.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000006islet of Langerhans
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.15e4
  • 2.15e4
  • 2.17e4
  • 2.36e4
60.90
  • 60.90
  • 60.53
  • 57.16
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000317colonic mucosa
  • UBERON:0000104life cycle
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000113post-juvenile adult stage
2.16e4
  • 2.16e4
  • 2.20e4
  • 2.48e4
60.82
  • 60.82
  • 60.07
  • 54.95
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005200thoracic mammary gland
  • HsapDv:0000089young adult stage (human)
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
2.18e4
  • 2.18e4
  • 2.76e4
  • 2.96e4
  • 3.47e4
  • 3.52e4
  • 3.78e4
60.41
  • 60.41
  • 49.83
  • 46.32
  • 36.96
  • 36.14
  • 31.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001233right adrenal gland
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
2.18e4
  • 2.18e4
  • 2.23e4
  • 2.25e4
60.41
  • 60.41
  • 59.45
  • 59.06
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
2.19e4
  • 2.19e4
60.30
  • 60.30
AEIR
  • AEIR
UBERON:0013473lower esophagus
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.21e4
  • 2.21e4
  • 2.23e4
59.87
  • 59.87
  • 59.45
AEIR
  • AEIR
  • AEIR
UBERON:0001875globus pallidus
  • UBERON:0000104life cycle
2.24e4
  • 2.24e4
59.31
  • 59.31
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
2.24e4
  • 2.24e4
  • 2.37e4
  • 2.44e4
  • 2.82e4
  • 3.03e4
59.26
  • 59.26
  • 56.94
  • 55.78
  • 48.87
  • 45.03
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0034919juvenile stage
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:00000856-12 year-old child stage (human)
  • UBERON:0000104life cycle
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:00000842-5 year-old child stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.25e4
  • 2.25e4
  • 2.95e4
  • 2.98e4
  • 3.06e4
  • 3.10e4
  • 3.10e4
  • 3.11e4
  • 3.28e4
  • 3.41e4
  • 3.60e4
  • 3.64e4
59.14
  • 59.14
  • 46.51
  • 45.97
  • 44.41
  • 43.77
  • 43.69
  • 43.49
  • 40.43
  • 38.07
  • 34.64
  • 33.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • HsapDv:000009025-44 year-old human stage (human)
2.26e4
  • 2.26e4
58.98
  • 58.98
AEIR
  • AEIR
UBERON:0035825left adrenal gland cortex
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
2.27e4
  • 2.27e4
  • 2.63e4
  • 2.76e4
58.72
  • 58.72
  • 52.28
  • 49.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002119left ovary
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
2.28e4
  • 2.28e4
  • 2.37e4
  • 2.44e4
58.59
  • 58.59
  • 56.90
  • 55.66
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001150body of pancreas
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
2.31e4
  • 2.31e4
  • 2.38e4
  • 2.43e4
  • 2.43e4
  • 2.50e4
58.14
  • 58.14
  • 56.72
  • 55.91
  • 55.86
  • 54.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001296myometrium
  • UBERON:0000104life cycle
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000091human late adulthood stage (human)
2.31e4
  • 2.31e4
  • 2.47e4
  • 2.90e4
  • 3.19e4
  • 3.46e4
58.10
  • 58.10
  • 55.23
  • 47.34
  • 42.01
  • 37.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003889fallopian tube
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.33e4
  • 2.33e4
  • 2.50e4
57.72
  • 57.72
  • 54.63
AEIR
  • AEIR
  • AEIR
UBERON:0002021occipital lobe
  • HsapDv:0000092human middle aged stage (human)
2.36e4
  • 2.36e4
57.23
  • 57.23
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0000104life cycle
2.36e4
  • 2.36e4
57.13
  • 57.13
AEIR
  • AEIR
UBERON:0002477medial globus pallidus
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
2.37e4
  • 2.37e4
  • 2.39e4
56.96
  • 56.96
  • 56.53
AEIR
  • AEIR
  • AEIR
UBERON:0001234left adrenal gland
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.38e4
  • 2.38e4
  • 2.39e4
  • 2.62e4
  • 2.68e4
56.79
  • 56.79
  • 56.65
  • 52.36
  • 51.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • UBERON:0000104life cycle
  • HsapDv:0000088human early adulthood stage (human)
2.40e4
  • 2.40e4
  • 2.74e4
  • 2.75e4
  • 2.80e4
  • 2.91e4
  • 2.96e4
  • 2.96e4
56.38
  • 56.38
  • 50.26
  • 50.15
  • 49.08
  • 47.24
  • 46.20
  • 46.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003729mouth mucosa
  • UBERON:0000104life cycle
2.40e4
  • 2.40e4
56.36
  • 56.36
AEIR
  • AEIR
UBERON:0035841esophagogastric junction muscularis propria
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
2.41e4
  • 2.41e4
  • 2.41e4
  • 2.50e4
  • 2.53e4
  • 2.56e4
56.25
  • 56.25
  • 56.18
  • 54.58
  • 54.04
  • 53.56
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.43e4
  • 2.43e4
  • 3.22e4
55.83
  • 55.83
  • 41.56
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.45e4
  • 2.45e4
  • 2.47e4
  • 3.75e4
55.56
  • 55.56
  • 55.13
  • 31.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
2.45e4
  • 2.45e4
55.54
  • 55.54
AEIR
  • AEIR
UBERON:0035833lower esophagus muscularis layer
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.45e4
  • 2.45e4
  • 2.55e4
  • 2.68e4
  • 2.70e4
55.47
  • 55.47
  • 53.64
  • 51.30
  • 51.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0035805muscle layer of sigmoid colon
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.48e4
  • 2.48e4
  • 2.67e4
  • 2.68e4
  • 2.72e4
  • 2.78e4
55.02
  • 55.02
  • 51.49
  • 51.36
  • 50.65
  • 49.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000197third LMP month human stage (human)
  • HsapDv:0000199fifth LMP month human stage (human)
2.48e4
  • 2.48e4
  • 2.51e4
  • 2.83e4
  • 3.06e4
  • 3.23e4
  • 3.24e4
54.98
  • 54.98
  • 54.38
  • 48.62
  • 44.44
  • 41.35
  • 41.19
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0000104life cycle
2.53e4
  • 2.53e4
54.08
  • 54.08
AEIR
  • AEIR
UBERON:0035827right adrenal gland cortex
  • HsapDv:0000091human late adulthood stage (human)
2.56e4
  • 2.56e4
53.57
  • 53.57
AEIR
  • AEIR
UBERON:0002107liver
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000104life cycle
  • UBERON:0034920infant stage
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000092human middle aged stage (human)
2.59e4
  • 2.59e4
  • 2.65e4
  • 2.79e4
  • 2.83e4
  • 3.90e4
  • 4.50e4
53.06
  • 53.06
  • 51.83
  • 49.38
  • 48.68
  • 29.14
  • 18.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001323tibial nerve
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
2.67e4
  • 2.67e4
  • 3.17e4
  • 3.20e4
  • 3.28e4
51.56
  • 51.56
  • 42.48
  • 41.85
  • 40.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002250popliteal artery
  • HsapDv:0000092human middle aged stage (human)
2.70e4
  • 2.70e4
50.89
  • 50.89
AEIR
  • AEIR
UBERON:0001161body of stomach
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
2.72e4
  • 2.72e4
  • 2.77e4
  • 2.86e4
  • 2.91e4
  • 2.93e4
50.57
  • 50.57
  • 49.72
  • 48.05
  • 47.09
  • 46.84
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000088human early adulthood stage (human)
2.75e4
  • 2.75e4
  • 3.21e4
  • 4.04e4
50.12
  • 50.12
  • 41.80
  • 26.62
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001830minor salivary gland
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
2.80e4
  • 2.80e4
  • 3.06e4
49.08
  • 49.08
  • 44.36
AEIR
  • AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.80e4
  • 2.80e4
  • 2.90e4
  • 3.27e4
49.07
  • 49.07
  • 47.39
  • 40.69
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001120left lobe of thyroid gland
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
2.81e4
  • 2.81e4
  • 2.87e4
  • 2.97e4
  • 3.00e4
  • 3.07e4
48.96
  • 48.96
  • 47.82
  • 46.09
  • 45.51
  • 44.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0015488sural nerve
  • HsapDv:0000092human middle aged stage (human)
2.81e4
  • 2.81e4
48.94
  • 48.94
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000113post-juvenile adult stage
2.91e4
  • 2.91e4
  • 3.22e4
  • 3.83e4
47.08
  • 47.08
  • 41.52
  • 30.48
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001157transverse colon
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.97e4
  • 2.97e4
  • 3.15e4
  • 3.30e4
46.13
  • 46.13
  • 42.85
  • 40.03
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004534right testis
  • HsapDv:0000087human adult stage (human)
3.06e4
  • 3.06e4
44.46
  • 44.46
AEIR
  • AEIR
UBERON:0007610tibial artery
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
3.07e4
  • 3.07e4
  • 3.14e4
  • 3.18e4
44.34
  • 44.34
  • 42.92
  • 42.27
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003701calcaneal tendon
  • HsapDv:000009465-79 year-old human stage (human)
3.08e4
  • 3.08e4
44.09
  • 44.09
AEIR
  • AEIR
UBERON:0001950neocortex
  • HsapDv:0000199fifth LMP month human stage (human)
3.16e4
  • 3.16e4
42.58
  • 42.58
AEIR
  • AEIR
UBERON:0004533left testis
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.17e4
  • 3.17e4
  • 3.21e4
  • 3.23e4
  • 3.24e4
42.38
  • 42.38
  • 41.68
  • 41.42
  • 41.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
PBA:294022000subventricular zone (inner) (primate)
  • HsapDv:0000198fourth LMP month human stage (human)
3.18e4
  • 3.18e4
42.29
  • 42.29
AEIR
  • AEIR
UBERON:0003053ventricular zone
  • HsapDv:0000199fifth LMP month human stage (human)
3.18e4
  • 3.18e4
42.26
  • 42.26
AEIR
  • AEIR
PBA:294021980subventricular zone (outer) (primate)
  • HsapDv:0000199fifth LMP month human stage (human)
3.29e4
  • 3.29e4
40.35
  • 40.35
AEIR
  • AEIR
UBERON:0001416skin of abdomen
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.33e4
  • 3.33e4
  • 3.43e4
39.47
  • 39.47
  • 37.78
AEIR
  • AEIR
  • AEIR
UBERON:0001511skin of leg
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.40e4
  • 3.40e4
  • 3.65e4
38.25
  • 38.25
  • 33.77
AEIR
  • AEIR
  • AEIR
UBERON:0002469esophagus mucosa
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.44e4
  • 3.44e4
  • 3.65e4
37.63
  • 37.63
  • 33.81
AEIR
  • AEIR
  • AEIR
UBERON:0001496ascending aorta
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.49e4
  • 3.49e4
  • 3.68e4
36.58
  • 36.58
  • 33.13
AEIR
  • AEIR
  • AEIR
CL:0000576monocyte
  • UBERON:0000113post-juvenile adult stage
3.63e4
  • 3.63e4
34.10
  • 34.10
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression

Orthology information comes from OMA : ENSG00000100987.

Cross-references

CCDSCCDS13168 (CCDS13168.1), CCDS13169 (CCDS13169.1), CCDS58766 (CCDS58766.1), CCDS58767 (CCDS58767.1)
EnsemblENSG00000100987 (VSX1)
HGNCHGNC:12723 (VSX1)
EMBLAF176797, AF251033, AF251034, AL080312, BC126228, BC136497, DQ854807, DQ854808, DQ854809, DQ854810, DQ854811, DQ854812, GU138372
OncoMXVSX1 (VSX1)
Uniprot/SWISSPROTQ9NZR4, VSX1_HUMAN

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