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H. sapiens Gene: LGALS13 - ENSG00000105198 - Homo sapiens (human)

General information

Ensembl IDENSG00000105198
NameLGALS13
Descriptionlectin, galactoside-binding, soluble, 13 [Source:HGNC Symbol;Acc:HGNC:15449]
OrganismHomo sapiens (human)
Synonym(s)c5hz15, gal13, plac8, pp13
Orthologs(s)4 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0007106chorionic villus
  • HsapDv:000007538th week post-fertilization and over human stage (human)
465
  • 465
99.16
  • 99.16
AEIR
  • AEIR
UBERON:0001987placenta
  • HsapDv:0000198fourth LMP month human stage (human)
  • HsapDv:000007538th week post-fertilization and over human stage (human)
  • HsapDv:0000203ninth LMP month human stage (human)
  • UBERON:0000068embryo stage
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000197third LMP month human stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
  • UBERON:0000111organogenesis stage
  • UBERON:0007220late embryonic stage
1.06e3
  • 1.06e3
  • 1.64e3
  • 2.84e3
  • 2.94e3
  • 3.04e3
  • 5.53e3
  • 6.44e3
  • 6.45e3
  • 7.38e3
  • 9.00e3
  • 1.40e4
98.08
  • 98.08
  • 97.01
  • 94.84
  • 94.66
  • 94.49
  • 89.96
  • 88.32
  • 88.29
  • 86.61
  • 83.66
  • 74.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • HsapDv:000009465-79 year-old human stage (human)
  • UBERON:0000104life cycle
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
1.67e4
  • 1.67e4
  • 2.41e4
  • 3.12e4
  • 3.17e4
69.65
  • 69.65
  • 56.30
  • 43.39
  • 42.46
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
2.01e4
  • 2.01e4
63.42
  • 63.42
AEIR
  • AEIR
UBERON:0009835anterior cingulate cortex
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.11e4
  • 2.11e4
  • 3.06e4
  • 3.63e4
  • 3.67e4
61.77
  • 61.77
  • 44.41
  • 34.10
  • 33.34
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • HsapDv:000009580 year-old and over human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0034920infant stage
  • UBERON:0000104life cycle
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000113post-juvenile adult stage
2.24e4
  • 2.24e4
  • 2.84e4
  • 2.95e4
  • 3.21e4
  • 3.48e4
  • 3.59e4
  • 3.73e4
59.30
  • 59.30
  • 48.35
  • 46.49
  • 41.78
  • 36.82
  • 34.73
  • 32.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000019sperm
  • HsapDv:0000088human early adulthood stage (human)
2.39e4
  • 2.39e4
56.57
  • 56.57
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.43e4
  • 2.43e4
  • 3.28e4
55.95
  • 55.95
  • 40.40
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • HsapDv:0000089young adult stage (human)
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.48e4
  • 2.48e4
  • 2.88e4
  • 3.08e4
  • 3.79e4
54.98
  • 54.98
  • 47.73
  • 44.09
  • 31.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.55e4
  • 2.55e4
  • 2.66e4
  • 2.76e4
  • 2.85e4
  • 2.94e4
  • 3.31e4
53.77
  • 53.77
  • 51.63
  • 49.85
  • 48.31
  • 46.67
  • 39.91
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002245cerebellar hemisphere
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • UBERON:0000104life cycle
  • HsapDv:0000091human late adulthood stage (human)
2.63e4
  • 2.63e4
  • 2.63e4
  • 3.09e4
  • 3.22e4
  • 3.22e4
52.23
  • 52.23
  • 52.18
  • 43.96
  • 41.52
  • 41.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002038substantia nigra
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000104life cycle
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
2.65e4
  • 2.65e4
  • 2.67e4
  • 3.20e4
  • 3.44e4
51.93
  • 51.93
  • 51.59
  • 41.93
  • 37.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004533left testis
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
2.69e4
  • 2.69e4
  • 2.75e4
  • 2.90e4
  • 2.93e4
  • 2.99e4
  • 3.22e4
51.15
  • 51.15
  • 50.06
  • 47.29
  • 46.81
  • 45.79
  • 41.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001388gastrocnemius
  • UBERON:0000104life cycle
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
2.71e4
  • 2.71e4
  • 3.90e4
  • 3.99e4
  • 4.00e4
  • 4.02e4
  • 4.06e4
50.83
  • 50.83
  • 29.27
  • 27.57
  • 27.32
  • 26.96
  • 26.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000006islet of Langerhans
  • UBERON:0000104life cycle
  • HsapDv:000009465-79 year-old human stage (human)
2.73e4
  • 2.73e4
  • 4.04e4
50.49
  • 50.49
  • 26.70
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.74e4
  • 2.74e4
  • 2.75e4
  • 3.22e4
50.32
  • 50.32
  • 50.14
  • 41.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
2.75e4
  • 2.75e4
  • 2.95e4
50.06
  • 50.06
  • 46.52
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.76e4
  • 2.76e4
  • 3.08e4
  • 4.06e4
49.83
  • 49.83
  • 44.09
  • 26.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0014890right hemisphere of cerebellum
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
2.77e4
  • 2.77e4
  • 3.10e4
  • 3.12e4
49.77
  • 49.77
  • 43.66
  • 43.30
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.77e4
  • 2.77e4
  • 3.95e4
49.71
  • 49.71
  • 28.22
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.81e4
  • 2.81e4
  • 3.99e4
49.03
  • 49.03
  • 27.54
AEIR
  • AEIR
  • AEIR
UBERON:0004534right testis
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.81e4
  • 2.81e4
  • 3.08e4
  • 3.12e4
  • 3.16e4
48.98
  • 48.98
  • 44.14
  • 43.31
  • 42.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.83e4
  • 2.83e4
  • 2.87e4
  • 3.01e4
  • 4.46e4
48.61
  • 48.61
  • 47.87
  • 45.44
  • 19.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
  • HsapDv:000009025-44 year-old human stage (human)
2.90e4
  • 2.90e4
  • 3.22e4
  • 3.49e4
47.26
  • 47.26
  • 41.61
  • 36.62
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • HsapDv:0000199fifth LMP month human stage (human)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007220late embryonic stage
2.96e4
  • 2.96e4
  • 3.05e4
  • 3.81e4
  • 4.50e4
46.33
  • 46.33
  • 44.65
  • 30.90
  • 18.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001873caudate nucleus
  • UBERON:0000104life cycle
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.15e4
  • 3.15e4
  • 4.53e4
  • 4.70e4
42.85
  • 42.85
  • 17.72
  • 14.68
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000113post-juvenile adult stage
3.15e4
  • 3.15e4
  • 3.19e4
  • 4.00e4
42.80
  • 42.80
  • 42.11
  • 27.41
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000113post-juvenile adult stage
3.21e4
  • 3.21e4
  • 3.23e4
  • 4.49e4
41.63
  • 41.63
  • 41.44
  • 18.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001874putamen
  • UBERON:0000104life cycle
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.24e4
  • 3.24e4
  • 4.51e4
  • 4.62e4
41.11
  • 41.11
  • 18.19
  • 16.14
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001882nucleus accumbens
  • UBERON:0000104life cycle
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.25e4
  • 3.25e4
  • 3.71e4
  • 3.86e4
  • 4.38e4
40.97
  • 40.97
  • 32.60
  • 29.91
  • 20.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
3.28e4
  • 3.28e4
40.53
  • 40.53
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.37e4
  • 3.37e4
  • 3.69e4
  • 3.91e4
  • 4.12e4
  • 4.17e4
38.79
  • 38.79
  • 32.98
  • 29.06
  • 25.23
  • 24.37
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006469C1 segment of cervical spinal cord
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.47e4
  • 3.47e4
  • 3.77e4
  • 3.96e4
36.98
  • 36.98
  • 31.58
  • 28.07
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001383muscle of leg
  • HsapDv:0000088human early adulthood stage (human)
3.54e4
  • 3.54e4
35.76
  • 35.76
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000113post-juvenile adult stage
3.65e4
  • 3.65e4
33.75
  • 33.75
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.72e4
  • 3.72e4
  • 3.95e4
  • 4.26e4
32.52
  • 32.52
  • 28.34
  • 22.70
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000576monocyte
  • UBERON:0000113post-juvenile adult stage
3.91e4
  • 3.91e4
29.06
  • 29.06
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000086adolescent stage (human)
  • UBERON:0000104life cycle
3.94e4
  • 3.94e4
  • 3.96e4
  • 4.00e4
28.41
  • 28.41
  • 28.01
  • 27.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009853body of uterus
  • HsapDv:0000087human adult stage (human)
4.38e4
  • 4.38e4
20.47
  • 20.47
AEIR
  • AEIR
UBERON:0001150body of pancreas
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
4.45e4
  • 4.45e4
  • 4.53e4
  • 4.57e4
19.15
  • 19.15
  • 17.78
  • 17.03
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001416skin of abdomen
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.48e4
  • 4.48e4
  • 4.68e4
18.58
  • 18.58
  • 15.08
AEIR
  • AEIR
  • AEIR
UBERON:0001157transverse colon
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.57e4
  • 4.57e4
  • 4.62e4
  • 4.64e4
17.05
  • 17.05
  • 16.19
  • 15.67
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Simiiformes2 genesCompare expression
Boreoeutheria3 genesCompare expression

Paralogy information comes from OMA : ENSG00000105198.

Cross-references

CCDSCCDS33024 (CCDS33024.1)
EnsemblENSG00000105198 (LGALS13)
HGNCHGNC:15449 (LGALS13)
EMBLAC005205, AF117383, AY055826, BC066304, BC069312, CH471126, FJ613336, FJ613337, FJ613338
OncoMXLGALS13 (LGALS13)
Uniprot/SPTREMBLA0A087X0J5, A0A087X0J5_HUMAN, M0R015, M0R015_HUMAN
Uniprot/SWISSPROTPP13_HUMAN, Q9UHV8

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