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H. sapiens Gene: PAX4 - ENSG00000106331 - Homo sapiens (human)

General information

Ensembl IDENSG00000106331
NamePAX4
Descriptionpaired box 4 [Source:HGNC Symbol;Acc:HGNC:8618]
OrganismHomo sapiens (human)
Synonym(s)kpd, mody9
Orthologs(s)13 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.70e4
  • 1.70e4
  • 2.46e4
69.19
  • 69.19
  • 55.35
AEIR
  • AEIR
  • AEIR
UBERON:0001052rectum
  • UBERON:0000113post-juvenile adult stage
1.78e4
  • 1.78e4
67.63
  • 67.63
AEIR
  • AEIR
UBERON:0001017central nervous system
  • UBERON:0000104life cycle
1.79e4
  • 1.79e4
67.43
  • 67.43
AEIR
  • AEIR
UBERON:0004991mucosa of transverse colon
  • HsapDv:000009025-44 year-old human stage (human)
1.82e4
  • 1.82e4
67.04
  • 67.04
AEIR
  • AEIR
UBERON:0000006islet of Langerhans
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000104life cycle
1.98e4
  • 1.98e4
  • 2.31e4
  • 2.57e4
  • 2.73e4
63.97
  • 63.97
  • 58.05
  • 53.41
  • 50.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000113post-juvenile adult stage
1.99e4
  • 1.99e4
  • 2.72e4
  • 2.88e4
  • 3.03e4
  • 3.50e4
  • 4.30e4
63.87
  • 63.87
  • 50.53
  • 47.73
  • 45.07
  • 36.51
  • 21.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000104life cycle
  • HsapDv:0000199fifth LMP month human stage (human)
2.09e4
  • 2.09e4
  • 2.29e4
62.12
  • 62.12
  • 58.35
AEIR
  • AEIR
  • AEIR
UBERON:0001159sigmoid colon
  • HsapDv:0000092human middle aged stage (human)
2.17e4
  • 2.17e4
60.55
  • 60.55
AEIR
  • AEIR
UBERON:0004534right testis
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.30e4
  • 2.30e4
  • 2.70e4
  • 2.85e4
  • 3.00e4
58.22
  • 58.22
  • 51.03
  • 48.30
  • 45.46
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001157transverse colon
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.45e4
  • 2.45e4
  • 2.53e4
  • 2.75e4
  • 3.16e4
  • 3.19e4
55.57
  • 55.57
  • 54.03
  • 50.08
  • 42.65
  • 42.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004533left testis
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
2.46e4
  • 2.46e4
  • 2.50e4
  • 2.60e4
  • 2.63e4
  • 2.64e4
  • 2.72e4
55.32
  • 55.32
  • 54.62
  • 52.81
  • 52.24
  • 52.15
  • 50.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003454small intestine Peyer's patch
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.47e4
  • 2.47e4
  • 2.54e4
  • 2.59e4
  • 2.79e4
  • 2.90e4
55.13
  • 55.13
  • 53.89
  • 53.02
  • 49.39
  • 47.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • HsapDv:0000089young adult stage (human)
  • HsapDv:0000198fourth LMP month human stage (human)
  • UBERON:0000113post-juvenile adult stage
2.50e4
  • 2.50e4
  • 3.17e4
  • 3.97e4
54.59
  • 54.59
  • 42.38
  • 27.83
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • HsapDv:000009580 year-old and over human stage (human)
  • UBERON:0034920infant stage
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.55e4
  • 2.55e4
  • 2.72e4
  • 2.83e4
  • 2.84e4
  • 3.00e4
  • 3.11e4
  • 3.79e4
53.61
  • 53.61
  • 50.58
  • 48.67
  • 48.35
  • 45.54
  • 43.52
  • 31.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0007220late embryonic stage
  • UBERON:0000104life cycle
  • HsapDv:0000089young adult stage (human)
  • HsapDv:0000087human adult stage (human)
2.60e4
  • 2.60e4
  • 3.06e4
  • 3.07e4
  • 4.37e4
52.85
  • 52.85
  • 44.40
  • 44.29
  • 20.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
PBA:294021980subventricular zone (outer) (primate)
  • HsapDv:0000199fifth LMP month human stage (human)
2.61e4
  • 2.61e4
52.54
  • 52.54
AEIR
  • AEIR
UBERON:0000995uterus
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
2.75e4
  • 2.75e4
  • 2.95e4
50.06
  • 50.06
  • 46.52
AEIR
  • AEIR
  • AEIR
UBERON:0001296myometrium
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
2.90e4
  • 2.90e4
  • 3.19e4
  • 3.43e4
  • 3.74e4
  • 4.12e4
  • 4.17e4
  • 4.41e4
47.26
  • 47.26
  • 42.01
  • 37.69
  • 32.08
  • 25.26
  • 24.36
  • 19.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000104life cycle
2.94e4
  • 2.94e4
46.63
  • 46.63
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.95e4
  • 2.95e4
  • 3.18e4
46.51
  • 46.51
  • 42.28
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000113post-juvenile adult stage
3.13e4
  • 3.13e4
  • 3.19e4
  • 3.96e4
43.25
  • 43.25
  • 42.17
  • 28.12
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001890forebrain
  • HsapDv:0000198fourth LMP month human stage (human)
  • HsapDv:0000199fifth LMP month human stage (human)
3.15e4
  • 3.15e4
  • 3.16e4
42.75
  • 42.75
  • 42.57
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
3.16e4
  • 3.16e4
42.61
  • 42.61
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
3.16e4
  • 3.16e4
42.55
  • 42.55
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • HsapDv:0000089young adult stage (human)
  • HsapDv:0000087human adult stage (human)
3.22e4
  • 3.22e4
  • 3.22e4
  • 4.66e4
41.61
  • 41.61
  • 41.58
  • 15.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
3.22e4
  • 3.22e4
  • 3.27e4
  • 3.57e4
  • 3.73e4
  • 4.19e4
  • 4.25e4
  • 4.36e4
41.58
  • 41.58
  • 40.57
  • 35.27
  • 32.34
  • 23.97
  • 22.81
  • 20.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
PBA:294022000subventricular zone (inner) (primate)
  • HsapDv:0000199fifth LMP month human stage (human)
  • HsapDv:0000198fourth LMP month human stage (human)
3.22e4
  • 3.22e4
  • 3.26e4
41.45
  • 41.45
  • 40.72
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000113post-juvenile adult stage
3.63e4
  • 3.63e4
34.05
  • 34.05
AEIR
  • AEIR
UBERON:0035805muscle layer of sigmoid colon
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.85e4
  • 3.85e4
  • 3.88e4
  • 3.93e4
  • 4.02e4
  • 4.17e4
30.11
  • 30.11
  • 29.49
  • 28.72
  • 26.96
  • 24.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000113post-juvenile adult stage
3.93e4
  • 3.93e4
28.68
  • 28.68
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • HsapDv:0000089young adult stage (human)
  • UBERON:0000104life cycle
3.98e4
  • 3.98e4
  • 4.04e4
27.71
  • 27.71
  • 26.61
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression

Orthology information comes from OMA : ENSG00000106331.

Cross-references

CCDSCCDS5797 (CCDS5797.1)
EnsemblENSG00000106331 (PAX4)
HGNCHGNC:8618 (PAX4)
EMBLAC073934, BC107149
OncoMXPAX4 (PAX4)
Uniprot/SPTREMBLA0A0A0MRB6, A0A0A0MRB6_HUMAN, G3V4Q1, G3V4Q1_HUMAN, J3KPG0, J3KPG0_HUMAN, Q3KNR5, Q3KNR5_HUMAN
Uniprot/SWISSPROTO43316, PAX4_HUMAN

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