H. sapiens Gene: CCL1 - ENSG00000108702 - Homo sapiens (human)

General information

Ensembl IDENSG00000108702
NameCCL1
Descriptionchemokine (C-C motif) ligand 1 [Source:HGNC Symbol;Acc:HGNC:10609]
OrganismHomo sapiens (human)
Synonym(s)b2r5g9, i-309, p500, q2m309, scya1, sise, tca3
Orthologs(s)13 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
1.99e4
  • 1.99e4
  • 3.41e4
  • 3.91e4
  • 4.58e4
63.86
  • 63.86
  • 38.13
  • 29.07
  • 16.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0034920infant stage
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
2.32e4
  • 2.32e4
  • 3.49e4
  • 4.55e4
  • 4.66e4
57.92
  • 57.92
  • 36.64
  • 17.30
  • 15.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000113post-juvenile adult stage
2.33e4
  • 2.33e4
57.63
  • 57.63
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0000113post-juvenile adult stage
2.39e4
  • 2.39e4
56.58
  • 56.58
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
2.53e4
  • 2.53e4
54.12
  • 54.12
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.61e4
  • 2.61e4
  • 2.71e4
  • 2.79e4
  • 3.05e4
  • 3.22e4
52.52
  • 52.52
  • 50.82
  • 49.34
  • 44.61
  • 41.45
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
2.62e4
  • 2.62e4
  • 3.95e4
  • 3.99e4
  • 4.10e4
  • 4.13e4
52.37
  • 52.37
  • 28.19
  • 27.56
  • 25.62
  • 24.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004534right testis
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.76e4
  • 2.76e4
  • 3.04e4
  • 3.10e4
  • 3.17e4
  • 3.64e4
49.87
  • 49.87
  • 44.82
  • 43.66
  • 42.41
  • 33.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • HsapDv:0000086adolescent stage (human)
  • HsapDv:0000089young adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000104life cycle
2.76e4
  • 2.76e4
  • 3.21e4
  • 3.64e4
  • 3.93e4
49.83
  • 49.83
  • 41.64
  • 33.99
  • 28.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001052rectum
  • UBERON:0000113post-juvenile adult stage
2.79e4
  • 2.79e4
49.37
  • 49.37
AEIR
  • AEIR
UBERON:0004533left testis
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
2.85e4
  • 2.85e4
  • 2.97e4
  • 3.05e4
  • 3.11e4
  • 3.13e4
  • 3.26e4
48.25
  • 48.25
  • 46.07
  • 44.68
  • 43.53
  • 43.18
  • 40.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009835anterior cingulate cortex
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.86e4
  • 2.86e4
  • 3.01e4
  • 3.42e4
48.11
  • 48.11
  • 45.28
  • 37.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002810right frontal lobe
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.00e4
  • 3.00e4
  • 3.05e4
  • 3.56e4
45.45
  • 45.45
  • 44.64
  • 35.29
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000113post-juvenile adult stage
3.09e4
  • 3.09e4
  • 3.76e4
43.96
  • 43.96
  • 31.70
AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
3.15e4
  • 3.15e4
42.75
  • 42.75
AEIR
  • AEIR
UBERON:0013540Brodmann (1909) area 9
  • HsapDv:000009580 year-old and over human stage (human)
3.28e4
  • 3.28e4
40.50
  • 40.50
AEIR
  • AEIR
UBERON:0003889fallopian tube
  • UBERON:0000113post-juvenile adult stage
3.34e4
  • 3.34e4
39.27
  • 39.27
AEIR
  • AEIR
CL:0000576monocyte
  • UBERON:0000113post-juvenile adult stage
3.35e4
  • 3.35e4
39.11
  • 39.11
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.42e4
  • 3.42e4
  • 3.58e4
  • 3.85e4
37.92
  • 37.92
  • 34.94
  • 30.08
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
3.45e4
  • 3.45e4
37.31
  • 37.31
AEIR
  • AEIR
UBERON:0001511skin of leg
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
3.49e4
  • 3.49e4
  • 4.27e4
  • 4.30e4
  • 4.32e4
  • 4.36e4
36.56
  • 36.56
  • 22.49
  • 21.91
  • 21.50
  • 20.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
3.51e4
  • 3.51e4
36.24
  • 36.24
AEIR
  • AEIR
UBERON:0001873caudate nucleus
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.55e4
  • 3.55e4
  • 3.67e4
35.55
  • 35.55
  • 33.44
AEIR
  • AEIR
  • AEIR
UBERON:0001154vermiform appendix
  • UBERON:0000113post-juvenile adult stage
3.62e4
  • 3.62e4
34.30
  • 34.30
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:000009465-79 year-old human stage (human)
3.70e4
  • 3.70e4
  • 4.51e4
32.86
  • 32.86
  • 18.04
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000113post-juvenile adult stage
3.76e4
  • 3.76e4
31.74
  • 31.74
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000113post-juvenile adult stage
3.80e4
  • 3.80e4
31.05
  • 31.05
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000088human early adulthood stage (human)
3.83e4
  • 3.83e4
  • 4.17e4
30.48
  • 30.48
  • 24.33
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.85e4
  • 3.85e4
  • 4.03e4
  • 4.10e4
  • 4.10e4
  • 4.23e4
30.15
  • 30.15
  • 26.84
  • 25.59
  • 25.50
  • 23.19
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
3.86e4
  • 3.86e4
29.92
  • 29.92
AEIR
  • AEIR
UBERON:0001416skin of abdomen
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.88e4
  • 3.88e4
  • 4.20e4
  • 4.23e4
  • 4.35e4
29.63
  • 29.63
  • 23.79
  • 23.26
  • 21.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
3.89e4
  • 3.89e4
  • 4.55e4
  • 4.55e4
29.40
  • 29.40
  • 17.45
  • 17.43
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002110gall bladder
  • UBERON:0000113post-juvenile adult stage
3.94e4
  • 3.94e4
28.44
  • 28.44
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.95e4
  • 3.95e4
  • 4.09e4
28.24
  • 28.24
  • 25.77
AEIR
  • AEIR
  • AEIR
UBERON:0001874putamen
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.97e4
  • 3.97e4
  • 4.38e4
27.95
  • 27.95
  • 20.47
AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.99e4
  • 3.99e4
  • 4.42e4
  • 4.54e4
27.56
  • 27.56
  • 19.65
  • 17.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001157transverse colon
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.08e4
  • 4.08e4
  • 4.29e4
25.87
  • 25.87
  • 22.09
AEIR
  • AEIR
  • AEIR
UBERON:0003454small intestine Peyer's patch
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.17e4
  • 4.17e4
  • 4.22e4
24.22
  • 24.22
  • 23.34
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
4.30e4
  • 4.30e4
21.94
  • 21.94
AEIR
  • AEIR
UBERON:0002038substantia nigra
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.30e4
  • 4.30e4
  • 4.64e4
21.84
  • 21.84
  • 15.84
AEIR
  • AEIR
  • AEIR
UBERON:0002469esophagus mucosa
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.37e4
  • 4.37e4
  • 4.37e4
  • 4.44e4
20.74
  • 20.74
  • 20.58
  • 19.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
4.37e4
  • 4.37e4
20.65
  • 20.65
AEIR
  • AEIR
UBERON:0014890right hemisphere of cerebellum
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.40e4
  • 4.40e4
  • 4.74e4
20.18
  • 20.18
  • 13.91
AEIR
  • AEIR
  • AEIR
UBERON:0001323tibial nerve
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.45e4
  • 4.45e4
  • 4.58e4
19.16
  • 19.16
  • 16.90
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression

Orthology information comes from OMA : ENSG00000108702.

Cross-references

CCDSCCDS11282 (CCDS11282.1)
EnsemblENSG00000108702 (CCL1)
HGNCHGNC:10609 (CCL1)
EMBLAK312183, BC105073, BC105075, CH471147, M57502, M57506
OncoMXCCL1 (CCL1)
Uniprot/SWISSPROTCCL1_HUMAN, P22362

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