H. sapiens Gene: APOBEC1 - ENSG00000111701 - Homo sapiens (human)

General information

Ensembl IDENSG00000111701
NameAPOBEC1
Descriptionapolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:604]
OrganismHomo sapiens (human)
Synonym(s)apobec-1, bedp, cdar1, hepr, q9ue64, q9um71

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002114duodenum
  • HsapDv:0000088human early adulthood stage (human)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
987
  • 987
  • 2.21e3
  • 3.23e4
98.20949
  • 98.20949
  • 95.99094
  • 41.26971
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000399jejunal mucosa
  • UBERON:0000104life cycle
1.65e3
  • 1.65e3
97.00725
  • 97.00725
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000104life cycle
  • HsapDv:0000198fourth LMP month human stage (human)
  • HsapDv:0000199fifth LMP month human stage (human)
3.25e3
  • 3.25e3
  • 9.37e3
  • 1.61e4
94.09152
  • 94.09152
  • 82.98827
  • 70.80408
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003454small intestine Peyer's patch
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
6.08e3
  • 6.08e3
  • 7.50e3
  • 8.00e3
  • 1.06e4
  • 1.07e4
  • 2.16e4
88.95120
  • 88.95120
  • 86.37507
  • 85.47728
  • 80.69029
  • 80.65817
  • 60.79692
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001159sigmoid colon
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
9.29e3
  • 9.29e3
  • 1.74e4
83.12713
  • 83.12713
  • 68.45621
AEIR
  • AEIR
  • AEIR
UBERON:0004991mucosa of transverse colon
  • HsapDv:000009025-44 year-old human stage (human)
9.49e3
  • 9.49e3
82.76852
  • 82.76852
AEIR
  • AEIR
UBERON:0000317colonic mucosa
  • UBERON:0000104life cycle
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000113post-juvenile adult stage
1.10e4
  • 1.10e4
  • 1.14e4
  • 1.24e4
  • 1.97e4
80.09498
  • 80.09498
  • 79.23254
  • 77.53932
  • 64.27567
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • HsapDv:0000203ninth LMP month human stage (human)
  • HsapDv:000009580 year-old and over human stage (human)
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
1.25e4
  • 1.25e4
  • 1.48e4
  • 1.48e4
  • 2.00e4
  • 2.03e4
  • 2.03e4
  • 2.33e4
  • 2.87e4
  • 3.65e4
77.32193
  • 77.32193
  • 73.12422
  • 73.11959
  • 63.72255
  • 63.21419
  • 63.06048
  • 57.59871
  • 47.86641
  • 33.71251
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001199mucosa of stomach
  • HsapDv:0000091human late adulthood stage (human)
1.78e4
  • 1.78e4
67.62922
  • 67.62922
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000104life cycle
1.79e4
  • 1.79e4
67.57860
  • 67.57860
AEIR
  • AEIR
UBERON:0001157transverse colon
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
1.82e4
  • 1.82e4
  • 1.82e4
  • 2.07e4
  • 2.25e4
  • 2.41e4
66.99522
  • 66.99522
  • 66.92274
  • 62.46880
  • 59.14992
  • 56.24540
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000200sixth LMP month human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000199fifth LMP month human stage (human)
  • UBERON:0007220late embryonic stage
1.90e4
  • 1.90e4
  • 2.51e4
  • 2.53e4
  • 2.53e4
  • 2.61e4
  • 2.94e4
  • 3.68e4
  • 4.50e4
65.54936
  • 65.54936
  • 54.46271
  • 54.06160
  • 54.03207
  • 52.61887
  • 46.52392
  • 33.13763
  • 18.28030
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000006islet of Langerhans
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000104life cycle
1.93e4
  • 1.93e4
  • 2.05e4
  • 2.29e4
  • 2.73e4
65.00416
  • 65.00416
  • 62.72021
  • 58.34837
  • 50.49083
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002110gall bladder
  • UBERON:0000113post-juvenile adult stage
2.41e4
  • 2.41e4
56.25749
  • 56.25749
AEIR
  • AEIR
UBERON:0001052rectum
  • UBERON:0000113post-juvenile adult stage
2.45e4
  • 2.45e4
55.46578
  • 55.46578
AEIR
  • AEIR
UBERON:0002384connective tissue
  • UBERON:0000104life cycle
2.51e4
  • 2.51e4
54.37999
  • 54.37999
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000113post-juvenile adult stage
2.54e4
  • 2.54e4
  • 3.72e4
  • 4.35e4
53.91624
  • 53.91624
  • 32.35458
  • 21.07005
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004993mucosa of sigmoid colon
  • HsapDv:000009025-44 year-old human stage (human)
2.55e4
  • 2.55e4
53.62793
  • 53.62793
AEIR
  • AEIR
UBERON:0001161body of stomach
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
2.56e4
  • 2.56e4
  • 3.15e4
  • 3.26e4
  • 3.49e4
  • 3.69e4
53.46765
  • 53.46765
  • 42.76768
  • 40.72618
  • 36.65310
  • 33.05541
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001017central nervous system
  • UBERON:0000104life cycle
2.70e4
  • 2.70e4
51.05218
  • 51.05218
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0000104life cycle
2.71e4
  • 2.71e4
50.83693
  • 50.83693
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
2.81e4
  • 2.81e4
  • 4.21e4
49.02348
  • 49.02348
  • 23.59277
AEIR
  • AEIR
  • AEIR
UBERON:0001154vermiform appendix
  • UBERON:0000113post-juvenile adult stage
2.82e4
  • 2.82e4
48.76472
  • 48.76472
AEIR
  • AEIR
UBERON:0000473testis
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000089young adult stage (human)
  • HsapDv:0000198fourth LMP month human stage (human)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.84e4
  • 2.84e4
  • 3.04e4
  • 3.24e4
  • 3.48e4
  • 4.32e4
48.35204
  • 48.35204
  • 44.83500
  • 41.07168
  • 36.81183
  • 21.62215
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
2.90e4
  • 2.90e4
47.40393
  • 47.40393
AEIR
  • AEIR
UBERON:0002367prostate gland
  • UBERON:0000104life cycle
3.17e4
  • 3.17e4
42.39352
  • 42.39352
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
3.23e4
  • 3.23e4
41.37914
  • 41.37914
AEIR
  • AEIR
UBERON:0035805muscle layer of sigmoid colon
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
3.76e4
  • 3.76e4
  • 3.90e4
  • 4.03e4
  • 4.17e4
  • 4.24e4
31.64591
  • 31.64591
  • 29.25722
  • 26.76031
  • 24.28782
  • 22.91746
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001150body of pancreas
  • HsapDv:0000087human adult stage (human)
3.92e4
  • 3.92e4
28.80257
  • 28.80257
AEIR
  • AEIR
UBERON:0035841esophagogastric junction muscularis propria
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
4.05e4
  • 4.05e4
  • 4.42e4
  • 4.45e4
26.36697
  • 26.36697
  • 19.75273
  • 19.26877
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000087human adult stage (human)
4.25e4
  • 4.25e4
  • 4.55e4
22.87569
  • 22.87569
  • 17.42765
AEIR
  • AEIR
  • AEIR
UBERON:0035833lower esophagus muscularis layer
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.27e4
  • 4.27e4
  • 4.46e4
22.41406
  • 22.41406
  • 19.07501
AEIR
  • AEIR
  • AEIR
UBERON:0007610tibial artery
  • HsapDv:0000087human adult stage (human)
4.38e4
  • 4.38e4
20.38284
  • 20.38284
AEIR
  • AEIR
UBERON:0002469esophagus mucosa
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
4.39e4
  • 4.39e4
  • 4.43e4
20.29964
  • 20.29964
  • 19.49361
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

CCDSCCDS8579 (CCDS8579.1)
EMBLAB009426, AC006927, L25877, L26234, U72891, U78720
EnsemblENSG00000111701 (APOBEC1)
HGNCHGNC:604 (APOBEC1)
OncoMXAPOBEC1 (APOBEC1)
Uniprot/SPTREMBLA0A0B4J232, A0A0B4J232_HUMAN
Uniprot/SWISSPROTABEC1_HUMAN, P41238

Do not show this banner again