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H. sapiens Gene: ACTRT1 - ENSG00000123165 - Homo sapiens (human)

General information

Ensembl IDENSG00000123165
NameACTRT1
Descriptionactin-related protein T1 [Source:HGNC Symbol;Acc:HGNC:24027]
OrganismHomo sapiens (human)
Synonym(s)aip1, arip1, arp-t1, arpt1, hsd27, kiaa0705, q6x7c1, q96l10
Orthologs(s)12 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • HsapDv:000009580 year-old and over human stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0034920infant stage
  • HsapDv:0000089young adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
  • 1.50e4
  • 1.50e4
  • 1.60e4
  • 1.90e4
  • 1.93e4
  • 4.17e4
76.93
  • 76.93
  • 72.73
  • 72.70
  • 70.87
  • 65.51
  • 65.00
  • 24.34
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004534right testis
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
1.45e4
  • 1.45e4
  • 1.60e4
  • 1.77e4
  • 1.89e4
  • 2.25e4
73.74
  • 73.74
  • 70.96
  • 67.91
  • 65.71
  • 59.18
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004533left testis
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
1.71e4
  • 1.71e4
  • 1.76e4
  • 1.77e4
  • 1.78e4
  • 1.79e4
  • 1.85e4
68.89
  • 68.89
  • 68.06
  • 67.87
  • 67.65
  • 67.41
  • 66.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • HsapDv:0000087human adult stage (human)
3.13e4
  • 3.13e4
43.24
  • 43.24
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • HsapDv:0000089young adult stage (human)
  • UBERON:0000104life cycle
3.98e4
  • 3.98e4
  • 4.10e4
27.71
  • 27.71
  • 25.58
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
4.14e4
  • 4.14e4
24.75
  • 24.75
AEIR
  • AEIR
UBERON:0001388gastrocnemius
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
4.22e4
  • 4.22e4
  • 4.23e4
  • 4.29e4
23.35
  • 23.35
  • 23.28
  • 22.08
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • HsapDv:0000087human adult stage (human)
4.32e4
  • 4.32e4
21.49
  • 21.49
AEIR
  • AEIR
UBERON:0001323tibial nerve
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.59e4
  • 4.59e4
  • 4.60e4
16.63
  • 16.63
  • 16.47
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Euarchontoglires6 species7 genesCompare expression
Boreoeutheria10 species11 genesCompare expression
Amniota11 species12 genesCompare expression

Orthology information comes from OMA : ENSG00000123165.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Amniota1 geneCompare expression

Paralogy information comes from OMA : ENSG00000123165.

Cross-references

CCDSCCDS14611 (CCDS14611.1)
EnsemblENSG00000123165 (ACTRT1)
HGNCHGNC:24027 (ACTRT1)
EMBLAF440739, AY251532, BC014597, Z74696
OncoMXACTRT1 (ACTRT1)
Uniprot/SWISSPROTACTT1_HUMAN, Q8TDG2

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