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H. sapiens Gene: HOXC12 - ENSG00000123407 - Homo sapiens (human)

General information

Ensembl IDENSG00000123407
NameHOXC12
Descriptionhomeobox C12 [Source:HGNC Symbol;Acc:HGNC:5124]
OrganismHomo sapiens (human)
Synonym(s)hoc3f, hox3, hox3f, q9bxj6
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0015488sural nerve
  • HsapDv:0000092human middle aged stage (human)
1.32e4
  • 1.32e4
76.10
  • 76.10
AEIR
  • AEIR
UBERON:0001511skin of leg
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
1.45e4
  • 1.45e4
  • 1.47e4
  • 1.49e4
  • 1.58e4
  • 1.59e4
  • 1.62e4
73.67
  • 73.67
  • 73.38
  • 72.93
  • 71.27
  • 71.06
  • 70.59
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007610tibial artery
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
1.52e4
  • 1.52e4
  • 1.70e4
  • 1.70e4
  • 1.75e4
  • 1.81e4
  • 1.97e4
72.32
  • 72.32
  • 69.14
  • 69.10
  • 68.26
  • 67.12
  • 64.15
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002250popliteal artery
  • HsapDv:0000092human middle aged stage (human)
1.54e4
  • 1.54e4
72.06
  • 72.06
AEIR
  • AEIR
UBERON:0001416skin of abdomen
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
1.73e4
  • 1.73e4
  • 1.89e4
  • 1.89e4
  • 1.92e4
  • 1.96e4
  • 2.20e4
68.61
  • 68.61
  • 65.73
  • 65.66
  • 65.16
  • 64.44
  • 60.02
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
1.85e4
  • 1.85e4
  • 1.89e4
  • 1.96e4
  • 2.01e4
  • 2.23e4
  • 2.45e4
66.50
  • 66.50
  • 65.69
  • 64.39
  • 63.56
  • 59.52
  • 55.56
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000113post-juvenile adult stage
2.03e4
  • 2.03e4
  • 3.09e4
  • 4.18e4
63.11
  • 63.11
  • 43.82
  • 24.13
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.43e4
  • 2.43e4
  • 3.20e4
  • 3.25e4
55.89
  • 55.89
  • 41.82
  • 40.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000113post-juvenile adult stage
2.74e4
  • 2.74e4
  • 3.34e4
  • 4.35e4
50.21
  • 50.21
  • 39.32
  • 21.07
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001388gastrocnemius
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
2.77e4
  • 2.77e4
  • 2.80e4
49.74
  • 49.74
  • 49.15
AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
3.18e4
  • 3.18e4
42.28
  • 42.28
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
3.18e4
  • 3.18e4
42.22
  • 42.22
AEIR
  • AEIR
UBERON:0005200thoracic mammary gland
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
3.20e4
  • 3.20e4
  • 3.51e4
41.93
  • 41.93
  • 36.32
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • HsapDv:000009465-79 year-old human stage (human)
  • UBERON:0000113post-juvenile adult stage
3.21e4
  • 3.21e4
  • 3.88e4
  • 4.14e4
41.73
  • 41.73
  • 29.48
  • 24.75
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002358peritoneum
  • UBERON:0000104life cycle
3.23e4
  • 3.23e4
41.41
  • 41.41
AEIR
  • AEIR
UBERON:0002367prostate gland
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000113post-juvenile adult stage
3.24e4
  • 3.24e4
  • 3.47e4
  • 4.10e4
41.16
  • 41.16
  • 36.95
  • 25.58
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001323tibial nerve
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.25e4
  • 3.25e4
  • 3.32e4
  • 3.41e4
  • 3.43e4
40.94
  • 40.94
  • 39.80
  • 38.12
  • 37.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000092human middle aged stage (human)
3.59e4
  • 3.59e4
  • 3.67e4
  • 4.12e4
34.76
  • 34.76
  • 33.32
  • 25.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002118right ovary
  • HsapDv:0000087human adult stage (human)
3.73e4
  • 3.73e4
32.30
  • 32.30
AEIR
  • AEIR
UBERON:0004533left testis
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
4.05e4
  • 4.05e4
  • 4.07e4
  • 4.07e4
26.43
  • 26.43
  • 26.12
  • 26.07
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010414omental fat pad
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.17e4
  • 4.17e4
  • 4.37e4
24.23
  • 24.23
  • 20.69
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSG00000123407.

Cross-references

CCDSCCDS8866 (CCDS8866.1)
EnsemblENSG00000123407 (HOXC12)
HGNCHGNC:5124 (HOXC12)
EMBLAF328962, AF328963
OncoMXHOXC12 (HOXC12)
Uniprot/SWISSPROTHXC12_HUMAN, P31275

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