We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

H. sapiens Gene: ATXN3L - ENSG00000123594 - Homo sapiens (human)

General information

Ensembl IDENSG00000123594
NameATXN3L
Descriptionataxin 3-like [Source:HGNC Symbol;Acc:HGNC:24173]
OrganismHomo sapiens (human)
Synonym(s)atx3l, b2rny8, mjdl
Orthologs(s)1 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0034920infant stage
  • HsapDv:000009580 year-old and over human stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000089young adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
  • 1.27e4
  • 1.50e4
  • 1.78e4
  • 2.24e4
  • 2.59e4
  • 2.79e4
  • 3.28e4
79.80
  • 79.80
  • 76.91
  • 72.79
  • 67.60
  • 59.27
  • 53.04
  • 49.39
  • 40.44
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000019sperm
  • HsapDv:0000088human early adulthood stage (human)
1.13e4
  • 1.13e4
79.42
  • 79.42
AEIR
  • AEIR
UBERON:0004534right testis
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
1.59e4
  • 1.59e4
  • 1.72e4
  • 1.74e4
  • 1.84e4
  • 2.19e4
71.10
  • 71.10
  • 68.69
  • 68.40
  • 66.59
  • 60.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004533left testis
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
1.60e4
  • 1.60e4
  • 1.62e4
  • 1.69e4
  • 1.72e4
  • 1.80e4
  • 1.80e4
70.99
  • 70.99
  • 70.63
  • 69.40
  • 68.68
  • 67.38
  • 67.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001388gastrocnemius
  • UBERON:0000104life cycle
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.28e4
  • 2.28e4
  • 4.31e4
  • 4.35e4
  • 4.44e4
58.57
  • 58.57
  • 21.81
  • 21.09
  • 19.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000113post-juvenile adult stage
2.95e4
  • 2.95e4
  • 3.16e4
  • 3.18e4
46.51
  • 46.51
  • 42.67
  • 42.26
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.44e4
  • 3.44e4
  • 3.86e4
  • 3.94e4
  • 4.24e4
  • 4.25e4
37.51
  • 37.51
  • 29.92
  • 28.38
  • 23.01
  • 22.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Catarrhini1 species1 geneCompare expression

Orthology information comes from OMA : ENSG00000123594.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSG00000123594.

Cross-references

CCDSCCDS48080 (CCDS48080.1)
EnsemblENSG00000123594 (ATXN3L)
HGNCHGNC:24173 (ATXN3L)
EMBLAB050195, AC004674, BC137186, BC137187, CH471074
OncoMXATXN3L (ATXN3L)
Uniprot/SPTREMBLA0A087WVE5, A0A087WVE5_HUMAN
Uniprot/SWISSPROTATX3L_HUMAN, Q9H3M9

Do not show this banner again