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H. sapiens Gene: HIST1H1A - ENSG00000124610 - Homo sapiens (human)

General information

Ensembl IDENSG00000124610
NameHIST1H1A
Descriptionhistone cluster 1, H1a [Source:HGNC Symbol;Acc:HGNC:4715]
OrganismHomo sapiens (human)
Synonym(s)h1.1, h1a, h1f1, hist1, q3mj34
Orthologs(s)34 orthologs
Paralog(s)334 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002048lung
  • HsapDv:0000197third LMP month human stage (human)
  • HsapDv:0000199fifth LMP month human stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000089young adult stage (human)
  • UBERON:0007220late embryonic stage
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
319
  • 319
  • 1.84e3
  • 2.00e4
  • 2.32e4
  • 2.58e4
  • 2.88e4
  • 3.13e4
  • 4.30e4
99.42
  • 99.42
  • 96.66
  • 63.69
  • 57.95
  • 53.11
  • 47.73
  • 43.25
  • 21.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000023oocyte
  • HsapDv:0000087human adult stage (human)
413
  • 413
99.25
  • 99.25
AEIR
  • AEIR
UBERON:0002113kidney
  • HsapDv:0000197third LMP month human stage (human)
  • HsapDv:0000198fourth LMP month human stage (human)
  • HsapDv:0000199fifth LMP month human stage (human)
  • UBERON:0000104life cycle
644
  • 644
  • 931
  • 1.42e3
  • 2.99e4
98.83
  • 98.83
  • 98.31
  • 97.43
  • 45.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • HsapDv:0000198fourth LMP month human stage (human)
  • UBERON:0007220late embryonic stage
  • HsapDv:0000197third LMP month human stage (human)
  • HsapDv:0000199fifth LMP month human stage (human)
  • HsapDv:0000200sixth LMP month human stage (human)
  • HsapDv:0000089young adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
667
  • 667
  • 933
  • 942
  • 1.75e3
  • 4.99e3
  • 1.59e4
  • 1.87e4
  • 1.90e4
  • 2.16e4
  • 2.68e4
  • 4.41e4
98.79
  • 98.79
  • 98.31
  • 98.29
  • 96.83
  • 90.94
  • 71.19
  • 66.11
  • 65.54
  • 60.74
  • 51.29
  • 19.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • HsapDv:0000197third LMP month human stage (human)
  • HsapDv:0000199fifth LMP month human stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
797
  • 797
  • 2.31e3
  • 2.88e4
  • 2.91e4
  • 3.42e4
  • 3.63e4
  • 4.19e4
98.55
  • 98.55
  • 95.81
  • 47.79
  • 47.11
  • 37.94
  • 34.03
  • 23.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • HsapDv:0000197third LMP month human stage (human)
  • HsapDv:0000198fourth LMP month human stage (human)
  • HsapDv:0000199fifth LMP month human stage (human)
  • UBERON:0000104life cycle
1.42e3
  • 1.42e3
  • 2.93e3
  • 5.68e3
  • 4.28e4
97.43
  • 97.43
  • 94.68
  • 89.68
  • 22.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • HsapDv:0000199fifth LMP month human stage (human)
  • HsapDv:000009580 year-old and over human stage (human)
  • HsapDv:0000203ninth LMP month human stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000113post-juvenile adult stage
1.69e3
  • 1.69e3
  • 2.08e4
  • 2.19e4
  • 2.23e4
  • 2.64e4
  • 2.87e4
  • 4.46e4
96.93
  • 96.93
  • 62.22
  • 60.21
  • 59.60
  • 52.16
  • 47.87
  • 19.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000655secondary oocyte
  • UBERON:0000104life cycle
2.62e3
  • 2.62e3
95.25
  • 95.25
AEIR
  • AEIR
UBERON:0018303adrenal tissue
  • HsapDv:0000197third LMP month human stage (human)
  • HsapDv:0000199fifth LMP month human stage (human)
  • HsapDv:0000198fourth LMP month human stage (human)
2.96e3
  • 2.96e3
  • 1.33e4
  • 1.39e4
94.63
  • 94.63
  • 75.85
  • 74.82
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0002336buccal mucosa cell
  • HsapDv:000009025-44 year-old human stage (human)
6.01e3
  • 6.01e3
89.08
  • 89.08
AEIR
  • AEIR
UBERON:0008188tendon of biceps brachii
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
7.73e3
  • 7.73e3
  • 8.59e3
85.96
  • 85.96
  • 84.41
AEIR
  • AEIR
  • AEIR
UBERON:0003701calcaneal tendon
  • HsapDv:0000086adolescent stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000089young adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
8.61e3
  • 8.61e3
  • 8.96e3
  • 9.25e3
  • 9.25e3
  • 1.03e4
84.37
  • 84.37
  • 83.74
  • 83.21
  • 83.20
  • 81.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000111organogenesis stage
  • HsapDv:0000199fifth LMP month human stage (human)
  • HsapDv:0000198fourth LMP month human stage (human)
  • HsapDv:0000197third LMP month human stage (human)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.31e4
  • 1.31e4
  • 1.49e4
  • 1.56e4
  • 1.76e4
  • 2.71e4
  • 3.44e4
76.20
  • 76.20
  • 72.95
  • 71.67
  • 68.05
  • 50.73
  • 37.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000111organogenesis stage
  • HsapDv:0000197third LMP month human stage (human)
  • HsapDv:0000198fourth LMP month human stage (human)
  • HsapDv:0000199fifth LMP month human stage (human)
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000113post-juvenile adult stage
1.31e4
  • 1.31e4
  • 1.64e4
  • 1.80e4
  • 1.88e4
  • 2.54e4
  • 2.84e4
  • 3.66e4
  • 3.77e4
76.19
  • 76.19
  • 70.17
  • 67.37
  • 65.86
  • 53.88
  • 48.35
  • 33.49
  • 31.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003053ventricular zone
  • HsapDv:0000199fifth LMP month human stage (human)
  • HsapDv:0000198fourth LMP month human stage (human)
1.57e4
  • 1.57e4
  • 3.21e4
71.46
  • 71.46
  • 41.66
AEIR
  • AEIR
  • AEIR
UBERON:0001890forebrain
  • HsapDv:0000199fifth LMP month human stage (human)
  • HsapDv:0000198fourth LMP month human stage (human)
1.75e4
  • 1.75e4
  • 1.93e4
68.17
  • 68.17
  • 64.92
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • HsapDv:000009465-79 year-old human stage (human)
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000113post-juvenile adult stage
1.78e4
  • 1.78e4
  • 2.01e4
  • 2.29e4
  • 4.18e4
67.74
  • 67.74
  • 63.47
  • 58.39
  • 24.19
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • HsapDv:0000018CS11
  • HsapDv:0000017Carnegie stage 10 (human)
  • HsapDv:0000016CS09
  • HsapDv:0000020CS13
1.79e4
  • 1.79e4
  • 1.86e4
  • 1.95e4
  • 1.98e4
67.44
  • 67.44
  • 66.29
  • 64.66
  • 64.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002336corpus callosum
  • HsapDv:00000842-5 year-old child stage (human)
  • HsapDv:0000089young adult stage (human)
  • UBERON:0000104life cycle
  • HsapDv:0000086adolescent stage (human)
2.06e4
  • 2.06e4
  • 2.24e4
  • 2.78e4
  • 2.91e4
62.61
  • 62.61
  • 59.37
  • 49.55
  • 47.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.14e4
  • 2.14e4
  • 2.44e4
  • 2.62e4
  • 2.93e4
61.17
  • 61.17
  • 55.72
  • 52.36
  • 46.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000006islet of Langerhans
  • UBERON:0000104life cycle
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.14e4
  • 2.14e4
  • 3.80e4
  • 4.03e4
61.16
  • 61.16
  • 31.06
  • 26.75
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001826nasal cavity mucosa
  • UBERON:0000104life cycle
2.31e4
  • 2.31e4
57.98
  • 57.98
AEIR
  • AEIR
UBERON:0006920esophagus squamous epithelium
  • UBERON:0000104life cycle
2.35e4
  • 2.35e4
57.27
  • 57.27
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • HsapDv:0000089young adult stage (human)
  • HsapDv:0000198fourth LMP month human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000113post-juvenile adult stage
2.39e4
  • 2.39e4
  • 2.43e4
  • 2.59e4
  • 4.49e4
56.54
  • 56.54
  • 55.85
  • 52.96
  • 18.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0000104life cycle
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
2.41e4
  • 2.41e4
  • 2.69e4
  • 3.86e4
56.26
  • 56.26
  • 51.12
  • 29.89
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
2.44e4
  • 2.44e4
55.76
  • 55.76
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • HsapDv:0000199fifth LMP month human stage (human)
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
  • HsapDv:0000089young adult stage (human)
  • HsapDv:000009580 year-old and over human stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.46e4
  • 2.46e4
  • 3.03e4
  • 3.22e4
  • 3.22e4
  • 3.26e4
  • 3.54e4
55.28
  • 55.28
  • 45.01
  • 41.61
  • 41.58
  • 40.89
  • 35.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000113post-juvenile adult stage
2.54e4
  • 2.54e4
  • 2.65e4
  • 4.06e4
53.89
  • 53.89
  • 51.88
  • 26.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000113post-juvenile adult stage
2.55e4
  • 2.55e4
  • 2.73e4
  • 3.59e4
53.62
  • 53.62
  • 50.47
  • 34.83
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000104life cycle
  • UBERON:0007220late embryonic stage
  • HsapDv:000009580 year-old and over human stage (human)
  • HsapDv:0000089young adult stage (human)
  • HsapDv:0000087human adult stage (human)
2.63e4
  • 2.63e4
  • 2.68e4
  • 2.70e4
  • 3.02e4
  • 3.07e4
  • 3.64e4
52.28
  • 52.28
  • 51.32
  • 51.04
  • 45.10
  • 44.29
  • 33.84
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0000104life cycle
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
2.71e4
  • 2.71e4
  • 3.30e4
  • 3.45e4
  • 3.47e4
  • 3.60e4
50.72
  • 50.72
  • 40.15
  • 37.36
  • 37.04
  • 34.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
2.75e4
  • 2.75e4
  • 2.95e4
50.06
  • 50.06
  • 46.52
AEIR
  • AEIR
  • AEIR
UBERON:0004804oviduct epithelium
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
2.78e4
  • 2.78e4
  • 2.87e4
49.43
  • 49.43
  • 47.88
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000088human early adulthood stage (human)
2.80e4
  • 2.80e4
  • 3.24e4
  • 3.38e4
  • 3.70e4
  • 4.38e4
  • 4.60e4
49.17
  • 49.17
  • 41.18
  • 38.57
  • 32.87
  • 20.39
  • 16.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001296myometrium
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.86e4
  • 2.86e4
  • 3.19e4
  • 4.05e4
  • 4.15e4
48.05
  • 48.05
  • 42.01
  • 26.51
  • 24.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0000104life cycle
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
2.87e4
  • 2.87e4
  • 3.56e4
  • 3.85e4
  • 3.88e4
  • 3.93e4
  • 3.99e4
47.92
  • 47.92
  • 35.38
  • 30.10
  • 29.49
  • 28.62
  • 27.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
2.88e4
  • 2.88e4
  • 3.17e4
  • 3.45e4
  • 3.51e4
  • 3.70e4
  • 4.12e4
  • 4.23e4
  • 4.41e4
47.63
  • 47.63
  • 42.44
  • 37.38
  • 36.27
  • 32.81
  • 25.25
  • 23.27
  • 19.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000087human adult stage (human)
2.95e4
  • 2.95e4
  • 3.57e4
  • 3.75e4
46.51
  • 46.51
  • 35.15
  • 31.91
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.98e4
  • 2.98e4
  • 3.38e4
  • 3.79e4
45.96
  • 45.96
  • 38.60
  • 31.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.01e4
  • 3.01e4
  • 3.91e4
45.31
  • 45.31
  • 29.05
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000104life cycle
  • HsapDv:0000088human early adulthood stage (human)
  • UBERON:0000113post-juvenile adult stage
3.01e4
  • 3.01e4
  • 3.45e4
  • 4.32e4
45.29
  • 45.29
  • 37.29
  • 21.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005200thoracic mammary gland
  • UBERON:0000104life cycle
3.03e4
  • 3.03e4
45.00
  • 45.00
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0000113post-juvenile adult stage
3.14e4
  • 3.14e4
43.05
  • 43.05
AEIR
  • AEIR
UBERON:0002367prostate gland
  • UBERON:0000104life cycle
3.18e4
  • 3.18e4
42.26
  • 42.26
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • HsapDv:000009025-44 year-old human stage (human)
3.21e4
  • 3.21e4
41.65
  • 41.65
AEIR
  • AEIR
UBERON:0001120left lobe of thyroid gland
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.53e4
  • 3.53e4
  • 3.68e4
  • 3.70e4
35.98
  • 35.98
  • 33.24
  • 32.89
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004533left testis
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.61e4
  • 3.61e4
  • 3.64e4
  • 3.88e4
34.46
  • 34.46
  • 33.92
  • 29.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004534right testis
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.70e4
  • 3.70e4
  • 3.95e4
  • 4.01e4
32.88
  • 32.88
  • 28.22
  • 27.17
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
3.80e4
  • 3.80e4
30.97
  • 30.97
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • HsapDv:0000089young adult stage (human)
  • UBERON:0000104life cycle
3.86e4
  • 3.86e4
  • 4.01e4
29.95
  • 29.95
  • 27.18
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae1 species1 geneCompare expression
Catarrhini2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Tetrapoda12 species17 genesCompare expression
Euteleostomi13 species34 genesCompare expression

Orthology information comes from OMA : ENSG00000124610.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Tetrapoda4 genesCompare expression
Eukaryota334 genesCompare expression

Paralogy information comes from OMA : ENSG00000124610.

Cross-references

CCDSCCDS4569 (CCDS4569.1)
EnsemblENSG00000124610 (HIST1H1A)
HGNCHGNC:4715 (HIST1H1A)
EMBLAF531299, BC069492, BC101593, BC112140, U91328, X57130
OncoMXHIST1H1A (HIST1H1A)
Uniprot/SWISSPROTH11_HUMAN, Q02539

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