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H. sapiens Gene: BARHL1 - ENSG00000125492 - Homo sapiens (human)

General information

Ensembl IDENSG00000125492
NameBARHL1
DescriptionBarH-like homeobox 1 [Source:HGNC Symbol;Acc:HGNC:953]
OrganismHomo sapiens (human)
Synonym(s)q5t6v2, q9ny88
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0014890right hemisphere of cerebellum
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
4.23e3
  • 4.23e3
  • 5.22e3
  • 5.44e3
  • 6.15e3
  • 6.50e3
  • 8.21e3
92.32
  • 92.32
  • 90.52
  • 90.13
  • 88.83
  • 88.19
  • 85.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:000009580 year-old and over human stage (human)
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000089young adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
4.46e3
  • 4.46e3
  • 5.59e3
  • 9.38e3
  • 9.64e3
  • 1.57e4
  • 1.84e4
  • 2.00e4
91.90
  • 91.90
  • 89.86
  • 82.97
  • 82.49
  • 71.42
  • 66.66
  • 63.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002245cerebellar hemisphere
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • UBERON:0000104life cycle
5.47e3
  • 5.47e3
  • 6.04e3
  • 6.09e3
  • 6.24e3
  • 6.55e3
  • 6.79e3
  • 2.08e4
90.06
  • 90.06
  • 89.03
  • 88.94
  • 88.67
  • 88.11
  • 87.67
  • 62.18
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
1.80e4
  • 1.80e4
  • 2.14e4
67.28
  • 67.28
  • 61.12
AEIR
  • AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0000104life cycle
2.07e4
  • 2.07e4
62.35
  • 62.35
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000113post-juvenile adult stage
2.10e4
  • 2.10e4
  • 2.90e4
  • 4.06e4
61.94
  • 61.94
  • 47.31
  • 26.36
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002038substantia nigra
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.20e4
  • 2.20e4
  • 2.33e4
  • 2.36e4
  • 2.88e4
  • 3.14e4
60.02
  • 60.02
  • 57.66
  • 57.06
  • 47.62
  • 42.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • HsapDv:0000197third LMP month human stage (human)
  • HsapDv:0000089young adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000113post-juvenile adult stage
2.32e4
  • 2.32e4
  • 2.41e4
  • 2.42e4
  • 2.58e4
  • 3.95e4
57.86
  • 57.86
  • 56.28
  • 56.13
  • 53.15
  • 28.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001965substantia nigra pars compacta
  • UBERON:0000104life cycle
2.33e4
  • 2.33e4
57.78
  • 57.78
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.33e4
  • 2.33e4
  • 2.38e4
57.76
  • 57.76
  • 56.78
AEIR
  • AEIR
  • AEIR
UBERON:0007227superior vestibular nucleus
  • HsapDv:000009025-44 year-old human stage (human)
2.33e4
  • 2.33e4
57.74
  • 57.74
AEIR
  • AEIR
UBERON:0006469C1 segment of cervical spinal cord
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.35e4
  • 2.35e4
  • 2.67e4
  • 2.82e4
57.35
  • 57.35
  • 51.55
  • 48.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.37e4
  • 2.37e4
  • 2.70e4
  • 2.96e4
  • 3.14e4
56.89
  • 56.89
  • 50.93
  • 46.26
  • 42.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000104life cycle
2.39e4
  • 2.39e4
  • 3.21e4
56.52
  • 56.52
  • 41.68
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • HsapDv:0000089young adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
2.40e4
  • 2.40e4
  • 2.40e4
  • 3.38e4
  • 4.66e4
56.38
  • 56.38
  • 56.38
  • 38.66
  • 15.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
2.66e4
  • 2.66e4
  • 3.18e4
  • 3.30e4
  • 3.79e4
  • 3.81e4
  • 3.86e4
51.68
  • 51.68
  • 42.21
  • 40.02
  • 31.22
  • 30.80
  • 29.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.93e4
  • 2.93e4
  • 3.57e4
46.76
  • 46.76
  • 35.23
AEIR
  • AEIR
  • AEIR
UBERON:0000006islet of Langerhans
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.94e4
  • 2.94e4
  • 3.17e4
  • 3.67e4
46.60
  • 46.60
  • 42.37
  • 33.43
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • HsapDv:000009580 year-old and over human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.18e4
  • 3.18e4
  • 3.60e4
  • 3.77e4
42.29
  • 42.29
  • 34.66
  • 31.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.29e4
  • 3.29e4
  • 3.34e4
  • 3.68e4
  • 3.88e4
  • 4.15e4
40.30
  • 40.30
  • 39.32
  • 33.19
  • 29.61
  • 24.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001323tibial nerve
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
3.76e4
  • 3.76e4
  • 3.94e4
  • 3.98e4
31.68
  • 31.68
  • 28.48
  • 27.68
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002810right frontal lobe
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.79e4
  • 3.79e4
  • 3.88e4
  • 4.06e4
31.24
  • 31.24
  • 29.52
  • 26.21
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009835anterior cingulate cortex
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.80e4
  • 3.80e4
  • 3.89e4
  • 4.28e4
31.03
  • 31.03
  • 29.38
  • 22.26
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001511skin of leg
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.82e4
  • 3.82e4
  • 3.95e4
30.64
  • 30.64
  • 28.19
AEIR
  • AEIR
  • AEIR
UBERON:0001388gastrocnemius
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
3.93e4
  • 3.93e4
  • 4.07e4
  • 4.09e4
28.69
  • 28.69
  • 26.12
  • 25.68
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • HsapDv:0000089young adult stage (human)
  • HsapDv:0000086adolescent stage (human)
  • UBERON:0000104life cycle
3.98e4
  • 3.98e4
  • 4.00e4
  • 4.17e4
27.71
  • 27.71
  • 27.39
  • 24.35
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013540Brodmann (1909) area 9
  • HsapDv:000009465-79 year-old human stage (human)
4.13e4
  • 4.13e4
25.06
  • 25.06
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression

Orthology information comes from OMA : ENSG00000125492.

Cross-references

CCDSCCDS6950 (CCDS6950.1)
EnsemblENSG00000125492 (BARHL1)
HGNCHGNC:953 (BARHL1)
EMBLAF321618, AF325688, AJ237816, AK054797, AL354735, BC136956, BC136969, CH471090
OncoMXBARHL1 (BARHL1)
Uniprot/SWISSPROTBARH1_HUMAN, Q9BZE3

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