We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

H. sapiens Gene: VCY - ENSG00000129864 - Homo sapiens (human)

General information

Ensembl IDENSG00000129864
NameVCY
Descriptionvariable charge, Y-linked [Source:HGNC Symbol;Acc:HGNC:12668]
OrganismHomo sapiens (human)
Synonym(s)bpy1, vcy1, vcy1a
Orthologs(s)6 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004534right testis
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
1.15e3
  • 1.15e3
  • 1.88e3
  • 3.54e3
  • 1.46e4
  • 2.22e4
97.91
  • 97.91
  • 96.60
  • 93.58
  • 73.49
  • 59.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • HsapDv:0000089young adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0034920infant stage
  • UBERON:0000104life cycle
1.53e3
  • 1.53e3
  • 5.67e3
  • 5.97e3
  • 6.37e3
  • 2.63e4
  • 4.16e4
97.22
  • 97.22
  • 89.72
  • 89.17
  • 88.44
  • 52.33
  • 24.46
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004533left testis
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
3.10e3
  • 3.10e3
  • 8.17e3
  • 9.92e3
  • 1.06e4
  • 1.47e4
  • 1.84e4
94.37
  • 94.37
  • 85.17
  • 82.00
  • 80.74
  • 73.27
  • 66.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
3.96e4
  • 3.96e4
  • 4.13e4
28.14
  • 28.14
  • 24.95
AEIR
  • AEIR
  • AEIR
UBERON:0001388gastrocnemius
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
4.06e4
  • 4.06e4
  • 4.13e4
  • 4.29e4
26.21
  • 26.21
  • 25.00
  • 22.17
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.15e4
  • 4.15e4
  • 4.19e4
  • 4.26e4
  • 4.28e4
  • 4.36e4
24.65
  • 24.65
  • 23.86
  • 22.64
  • 22.21
  • 20.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001511skin of leg
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.17e4
  • 4.17e4
  • 4.59e4
24.34
  • 24.34
  • 16.72
AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0000113post-juvenile adult stage
4.20e4
  • 4.20e4
23.68
  • 23.68
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • HsapDv:0000087human adult stage (human)
4.29e4
  • 4.29e4
22.02
  • 22.02
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0000113post-juvenile adult stage
4.30e4
  • 4.30e4
21.94
  • 21.94
AEIR
  • AEIR
UBERON:0001830minor salivary gland
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
4.30e4
  • 4.30e4
  • 4.42e4
21.92
  • 21.92
  • 19.69
AEIR
  • AEIR
  • AEIR
UBERON:0010414omental fat pad
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.44e4
  • 4.44e4
  • 4.58e4
19.43
  • 19.43
  • 16.88
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Homininae5 genesCompare expression

Paralogy information comes from OMA : ENSG00000129864.

Cross-references

CCDSCCDS56617 (CCDS56617.1)
EnsemblENSG00000129864 (VCY)
HGNCHGNC:12668 (VCY)
EMBLAC006370, AF000979, BC056508
OncoMXVCY (VCY)
Uniprot/SWISSPROTO14598, VCY1_HUMAN

Do not show this banner again