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H. sapiens Gene: CDX4 - ENSG00000131264 - Homo sapiens (human)

General information

Ensembl IDENSG00000131264
NameCDX4
Descriptioncaudal type homeobox 4 [Source:HGNC Symbol;Acc:HGNC:1808]
OrganismHomo sapiens (human)
Synonym(s)600672, a1a513, q5js20
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • HsapDv:0000017Carnegie stage 10 (human)
  • HsapDv:0000016CS09
  • HsapDv:0000018CS11
1.30e4
  • 1.30e4
  • 1.50e4
  • 1.94e4
76.31
  • 76.31
  • 72.78
  • 64.74
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001416skin of abdomen
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
2.12e4
  • 2.12e4
  • 2.24e4
  • 2.29e4
  • 2.40e4
  • 2.43e4
  • 2.48e4
61.42
  • 61.42
  • 59.32
  • 58.42
  • 56.36
  • 55.85
  • 54.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001511skin of leg
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
2.37e4
  • 2.37e4
  • 2.56e4
  • 2.57e4
  • 2.58e4
  • 2.65e4
  • 2.91e4
56.96
  • 56.96
  • 53.54
  • 53.29
  • 53.21
  • 51.96
  • 47.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.16e4
  • 3.16e4
  • 4.30e4
42.64
  • 42.64
  • 21.94
AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.93e4
  • 3.93e4
  • 4.49e4
28.61
  • 28.61
  • 18.46
AEIR
  • AEIR
  • AEIR
UBERON:0001323tibial nerve
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.50e4
  • 4.50e4
  • 4.53e4
  • 4.64e4
18.22
  • 18.22
  • 17.68
  • 15.66
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Amniota11 species12 genesCompare expression
Tetrapoda12 species13 genesCompare expression
Euteleostomi13 species14 genesCompare expression

Orthology information comes from OMA : ENSG00000131264.

Cross-references

CCDSCCDS14424 (CCDS14424.1)
EnsemblENSG00000131264 (CDX4)
HGNCHGNC:1808 (CDX4)
EMBLAF003530, AF029877, AF029878, AF029879, AL450108, BC128233, CH471104
OncoMXCDX4 (CDX4)
Uniprot/SWISSPROTCDX4_HUMAN, O14627

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