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H. sapiens Gene: C3orf20 - ENSG00000131379 - Homo sapiens (human)

General information

Ensembl IDENSG00000131379
NameC3orf20
Descriptionchromosome 3 open reading frame 20 [Source:HGNC Symbol;Acc:HGNC:25320]
OrganismHomo sapiens (human)
Synonym(s)dkfzp434n1817, q7l0u6, q8ncp2, q9h0i7
Orthologs(s)12 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • HsapDv:000009580 year-old and over human stage (human)
  • UBERON:0034920infant stage
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000089young adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000197third LMP month human stage (human)
  • UBERON:0000104life cycle
9.77e3
  • 9.77e3
  • 1.24e4
  • 1.31e4
  • 1.43e4
  • 1.65e4
  • 1.72e4
  • 2.20e4
  • 3.23e4
  • 3.24e4
82.27
  • 82.27
  • 77.53
  • 76.28
  • 74.12
  • 70.06
  • 68.77
  • 60.14
  • 41.35
  • 41.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003244epithelium of mammary gland
  • UBERON:0000104life cycle
1.22e4
  • 1.22e4
77.89
  • 77.89
AEIR
  • AEIR
UBERON:0004534right testis
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
1.24e4
  • 1.24e4
  • 1.34e4
  • 1.56e4
  • 1.87e4
  • 2.17e4
77.42
  • 77.42
  • 75.66
  • 71.69
  • 66.02
  • 60.56
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004533left testis
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
1.31e4
  • 1.31e4
  • 1.35e4
  • 1.41e4
  • 1.42e4
  • 1.44e4
  • 1.52e4
76.26
  • 76.26
  • 75.55
  • 74.43
  • 74.13
  • 73.93
  • 72.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000019sperm
  • HsapDv:0000088human early adulthood stage (human)
1.60e4
  • 1.60e4
71.01
  • 71.01
AEIR
  • AEIR
UBERON:0001264pancreas
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.94e4
  • 1.94e4
  • 2.54e4
  • 3.20e4
64.69
  • 64.69
  • 53.82
  • 41.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001765mammary duct
  • UBERON:0000104life cycle
2.01e4
  • 2.01e4
63.54
  • 63.54
AEIR
  • AEIR
UBERON:0000178blood
  • HsapDv:0000089young adult stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • UBERON:0000104life cycle
2.04e4
  • 2.04e4
  • 2.15e4
  • 2.24e4
  • 2.29e4
  • 2.32e4
  • 2.49e4
  • 2.66e4
  • 2.76e4
63.02
  • 63.02
  • 60.99
  • 59.39
  • 58.36
  • 57.93
  • 54.84
  • 51.76
  • 49.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
2.13e4
  • 2.13e4
  • 2.28e4
  • 2.90e4
61.36
  • 61.36
  • 58.69
  • 47.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • HsapDv:0000092human middle aged stage (human)
2.14e4
  • 2.14e4
  • 3.21e4
  • 4.11e4
61.21
  • 61.21
  • 41.73
  • 25.30
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002336corpus callosum
  • HsapDv:00000856-12 year-old child stage (human)
  • HsapDv:00000842-5 year-old child stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
2.14e4
  • 2.14e4
  • 2.44e4
  • 2.79e4
61.10
  • 61.10
  • 55.61
  • 49.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.16e4
  • 2.16e4
  • 3.23e4
60.72
  • 60.72
  • 41.40
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000087human adult stage (human)
2.25e4
  • 2.25e4
  • 2.34e4
  • 2.48e4
  • 2.69e4
  • 3.15e4
59.12
  • 59.12
  • 57.57
  • 54.97
  • 51.24
  • 42.84
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001388gastrocnemius
  • UBERON:0000104life cycle
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
2.34e4
  • 2.34e4
  • 2.35e4
  • 2.38e4
  • 2.40e4
  • 2.40e4
  • 2.42e4
57.56
  • 57.56
  • 57.39
  • 56.81
  • 56.43
  • 56.41
  • 55.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000006islet of Langerhans
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
2.43e4
  • 2.43e4
  • 2.71e4
55.81
  • 55.81
  • 50.75
AEIR
  • AEIR
  • AEIR
UBERON:0002110gall bladder
  • UBERON:0000113post-juvenile adult stage
2.45e4
  • 2.45e4
55.48
  • 55.48
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000113post-juvenile adult stage
2.46e4
  • 2.46e4
55.25
  • 55.25
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
2.47e4
  • 2.47e4
  • 2.61e4
  • 2.70e4
  • 2.97e4
55.20
  • 55.20
  • 52.59
  • 50.99
  • 46.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
2.48e4
  • 2.48e4
54.95
  • 54.95
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0000104life cycle
  • HsapDv:0000086adolescent stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
2.51e4
  • 2.51e4
  • 2.74e4
  • 2.81e4
54.50
  • 54.50
  • 50.24
  • 48.89
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000104life cycle
2.56e4
  • 2.56e4
53.58
  • 53.58
AEIR
  • AEIR
UBERON:0001891midbrain
  • HsapDv:0000092human middle aged stage (human)
2.58e4
  • 2.58e4
53.09
  • 53.09
AEIR
  • AEIR
UBERON:0007023adult organism
  • HsapDv:0000087human adult stage (human)
2.60e4
  • 2.60e4
52.83
  • 52.83
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.61e4
  • 2.61e4
  • 2.86e4
  • 2.95e4
52.68
  • 52.68
  • 48.03
  • 46.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006469C1 segment of cervical spinal cord
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.64e4
  • 2.64e4
  • 2.70e4
  • 2.70e4
52.09
  • 52.09
  • 51.06
  • 51.03
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
2.66e4
  • 2.66e4
  • 2.87e4
51.76
  • 51.76
  • 47.88
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000104life cycle
  • HsapDv:0000092human middle aged stage (human)
2.68e4
  • 2.68e4
  • 3.07e4
  • 3.22e4
  • 3.28e4
51.27
  • 51.27
  • 44.28
  • 41.61
  • 40.37
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002038substantia nigra
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
2.70e4
  • 2.70e4
  • 2.80e4
  • 2.94e4
50.90
  • 50.90
  • 49.14
  • 46.62
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001154vermiform appendix
  • UBERON:0000113post-juvenile adult stage
2.71e4
  • 2.71e4
50.76
  • 50.76
AEIR
  • AEIR
UBERON:0010414omental fat pad
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.72e4
  • 2.72e4
  • 3.16e4
  • 3.18e4
  • 3.32e4
50.58
  • 50.58
  • 42.54
  • 42.32
  • 39.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001876amygdala
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.74e4
  • 2.74e4
  • 2.82e4
  • 2.93e4
50.29
  • 50.29
  • 48.80
  • 46.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • HsapDv:00000842-5 year-old child stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
2.76e4
  • 2.76e4
  • 2.91e4
  • 2.96e4
  • 3.01e4
49.97
  • 49.97
  • 47.09
  • 46.26
  • 45.37
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001150body of pancreas
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.85e4
  • 2.85e4
  • 2.95e4
  • 3.05e4
48.30
  • 48.30
  • 46.52
  • 44.61
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006631right atrium auricular region
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.85e4
  • 2.85e4
  • 2.89e4
  • 2.93e4
48.30
  • 48.30
  • 47.47
  • 46.81
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002810right frontal lobe
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
2.86e4
  • 2.86e4
  • 3.04e4
48.13
  • 48.13
  • 44.83
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
2.88e4
  • 2.88e4
  • 3.04e4
  • 3.20e4
47.64
  • 47.64
  • 44.77
  • 41.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000104life cycle
2.95e4
  • 2.95e4
  • 3.01e4
  • 3.11e4
  • 3.18e4
  • 3.58e4
46.52
  • 46.52
  • 45.35
  • 43.62
  • 42.23
  • 34.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001296myometrium
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.96e4
  • 2.96e4
  • 2.97e4
  • 3.12e4
  • 3.19e4
46.30
  • 46.30
  • 46.00
  • 43.36
  • 42.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
2.97e4
  • 2.97e4
  • 2.98e4
  • 2.99e4
  • 3.03e4
  • 3.20e4
46.14
  • 46.14
  • 45.89
  • 45.63
  • 44.97
  • 41.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001511skin of leg
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
2.97e4
  • 2.97e4
  • 2.99e4
  • 3.03e4
46.02
  • 46.02
  • 45.69
  • 44.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005200thoracic mammary gland
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • UBERON:0000104life cycle
2.99e4
  • 2.99e4
  • 2.99e4
  • 3.06e4
  • 3.14e4
45.73
  • 45.73
  • 45.64
  • 44.43
  • 43.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000113post-juvenile adult stage
2.99e4
  • 2.99e4
  • 3.22e4
  • 3.46e4
  • 3.53e4
45.63
  • 45.63
  • 41.52
  • 37.23
  • 35.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000113post-juvenile adult stage
3.01e4
  • 3.01e4
45.33
  • 45.33
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
3.03e4
  • 3.03e4
  • 3.10e4
  • 3.11e4
44.91
  • 44.91
  • 43.78
  • 43.61
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001323tibial nerve
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.06e4
  • 3.06e4
  • 3.10e4
44.47
  • 44.47
  • 43.77
AEIR
  • AEIR
  • AEIR
UBERON:0001161body of stomach
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.06e4
  • 3.06e4
  • 3.14e4
  • 3.25e4
44.37
  • 44.37
  • 42.94
  • 41.02
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007808adipose tissue of abdominal region
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000088human early adulthood stage (human)
3.17e4
  • 3.17e4
  • 3.22e4
42.43
  • 42.43
  • 41.59
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000111organogenesis stage
3.20e4
  • 3.20e4
  • 3.24e4
41.93
  • 41.93
  • 41.15
AEIR
  • AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0000104life cycle
3.21e4
  • 3.21e4
41.76
  • 41.76
AEIR
  • AEIR
UBERON:0007610tibial artery
  • HsapDv:0000087human adult stage (human)
3.23e4
  • 3.23e4
41.36
  • 41.36
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Amniota12 species12 genesCompare expression

Orthology information comes from OMA : ENSG00000131379.

Cross-references

CCDSCCDS33706 (CCDS33706.1), CCDS54555 (CCDS54555.1)
EnsemblENSG00000131379 (C3orf20)
HGNCHGNC:25320 (C3orf20)
EMBLAL136781, AL834386, BC030599, BC038406, CH471055
OncoMXC3orf20 (C3orf20)
Uniprot/SPTREMBLA0A024R2I4, A0A024R2I4_HUMAN
Uniprot/SWISSPROTCC020_HUMAN, Q8ND61

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