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H. sapiens Gene: LIN28A - ENSG00000131914 - Homo sapiens (human)

General information

Ensembl IDENSG00000131914
NameLIN28A
Descriptionlin-28 homolog A (C. elegans) [Source:HGNC Symbol;Acc:HGNC:15986]
OrganismHomo sapiens (human)
Synonym(s)csdd1, flj12457, lin-28, lin-28a, lin28, zcchc1
Orthologs(s)20 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • HsapDv:0000016CS09
  • HsapDv:0000017Carnegie stage 10 (human)
  • HsapDv:0000018CS11
  • HsapDv:0000019Carnegie stage 12 (human)
  • HsapDv:0000020CS13
  • HsapDv:0000021Carnegie stage 14 (human)
199
  • 199
  • 358
  • 423
  • 685
  • 2.51e3
  • 1.23e4
99.64
  • 99.64
  • 99.35
  • 99.23
  • 98.76
  • 95.45
  • 77.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000023oocyte
  • HsapDv:0000087human adult stage (human)
4.83e3
  • 4.83e3
91.23
  • 91.23
AEIR
  • AEIR
CL:0000655secondary oocyte
  • UBERON:0000104life cycle
4.92e3
  • 4.92e3
91.07
  • 91.07
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000111organogenesis stage
  • HsapDv:0000197third LMP month human stage (human)
  • HsapDv:0000198fourth LMP month human stage (human)
  • HsapDv:0000199fifth LMP month human stage (human)
  • UBERON:0000104life cycle
5.79e3
  • 5.79e3
  • 5.94e3
  • 6.77e3
  • 8.15e3
  • 2.96e4
89.49
  • 89.49
  • 89.21
  • 87.71
  • 85.20
  • 46.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000019sperm
  • HsapDv:0000088human early adulthood stage (human)
6.34e3
  • 6.34e3
88.49
  • 88.49
AEIR
  • AEIR
CL:0002336buccal mucosa cell
  • HsapDv:000009025-44 year-old human stage (human)
1.01e4
  • 1.01e4
81.60
  • 81.60
AEIR
  • AEIR
UBERON:0000473testis
  • HsapDv:0000197third LMP month human stage (human)
  • HsapDv:000009580 year-old and over human stage (human)
  • UBERON:0000111organogenesis stage
  • UBERON:0034920infant stage
  • HsapDv:0000198fourth LMP month human stage (human)
  • HsapDv:0000199fifth LMP month human stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000104life cycle
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000089young adult stage (human)
  • HsapDv:0000087human adult stage (human)
1.28e4
  • 1.28e4
  • 1.40e4
  • 1.42e4
  • 1.52e4
  • 1.58e4
  • 1.69e4
  • 1.86e4
  • 2.08e4
  • 2.55e4
  • 2.78e4
  • 2.83e4
  • 2.84e4
76.76
  • 76.76
  • 74.61
  • 74.23
  • 72.40
  • 71.40
  • 69.27
  • 66.22
  • 62.22
  • 53.62
  • 49.48
  • 48.59
  • 48.35
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004533left testis
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
1.44e4
  • 1.44e4
  • 1.54e4
  • 1.56e4
  • 1.60e4
  • 1.60e4
  • 1.63e4
73.80
  • 73.80
  • 72.04
  • 71.62
  • 70.97
  • 70.88
  • 70.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004534right testis
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
1.52e4
  • 1.52e4
  • 1.52e4
  • 1.58e4
  • 2.14e4
  • 2.38e4
72.48
  • 72.48
  • 72.39
  • 71.35
  • 61.11
  • 56.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003244epithelium of mammary gland
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
1.74e4
  • 1.74e4
  • 2.71e4
68.45
  • 68.45
  • 50.88
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • HsapDv:0000197third LMP month human stage (human)
  • HsapDv:0000198fourth LMP month human stage (human)
  • HsapDv:0000199fifth LMP month human stage (human)
  • UBERON:0000104life cycle
2.04e4
  • 2.04e4
  • 2.18e4
  • 2.27e4
  • 3.71e4
62.96
  • 62.96
  • 60.41
  • 58.87
  • 32.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • HsapDv:0000197third LMP month human stage (human)
  • HsapDv:0000198fourth LMP month human stage (human)
  • UBERON:0000104life cycle
2.11e4
  • 2.11e4
  • 2.33e4
  • 3.20e4
61.77
  • 61.77
  • 57.72
  • 41.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0018303adrenal tissue
  • HsapDv:0000198fourth LMP month human stage (human)
  • HsapDv:0000199fifth LMP month human stage (human)
2.25e4
  • 2.25e4
  • 2.38e4
59.19
  • 59.19
  • 56.77
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000198fourth LMP month human stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000200sixth LMP month human stage (human)
  • HsapDv:0000199fifth LMP month human stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000087human adult stage (human)
  • UBERON:0007220late embryonic stage
  • UBERON:0000104life cycle
2.28e4
  • 2.28e4
  • 2.31e4
  • 2.33e4
  • 2.47e4
  • 2.54e4
  • 2.56e4
  • 2.73e4
  • 2.94e4
  • 3.09e4
58.67
  • 58.67
  • 58.02
  • 57.74
  • 55.12
  • 53.88
  • 53.44
  • 50.37
  • 46.56
  • 43.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • HsapDv:0000203ninth LMP month human stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:000009580 year-old and over human stage (human)
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.39e4
  • 2.39e4
  • 2.39e4
  • 2.54e4
  • 2.87e4
  • 3.05e4
  • 3.66e4
56.66
  • 56.66
  • 56.60
  • 53.94
  • 47.87
  • 44.70
  • 33.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000089young adult stage (human)
2.47e4
  • 2.47e4
  • 2.72e4
  • 3.07e4
55.07
  • 55.07
  • 50.61
  • 44.29
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.55e4
  • 2.55e4
  • 3.05e4
53.69
  • 53.69
  • 44.60
AEIR
  • AEIR
  • AEIR
UBERON:0001388gastrocnemius
  • UBERON:0000104life cycle
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.62e4
  • 2.62e4
  • 3.32e4
  • 3.41e4
  • 3.48e4
52.44
  • 52.44
  • 39.70
  • 38.07
  • 36.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
2.75e4
  • 2.75e4
  • 2.95e4
50.06
  • 50.06
  • 46.52
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.76e4
  • 2.76e4
  • 3.10e4
  • 3.57e4
49.83
  • 49.83
  • 43.79
  • 35.13
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002384connective tissue
  • UBERON:0000104life cycle
2.81e4
  • 2.81e4
49.01
  • 49.01
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034919juvenile stage
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
2.84e4
  • 2.84e4
  • 2.90e4
  • 3.11e4
  • 3.11e4
  • 3.21e4
  • 3.43e4
  • 3.55e4
  • 3.56e4
48.43
  • 48.43
  • 47.37
  • 43.55
  • 43.47
  • 41.79
  • 37.68
  • 35.53
  • 35.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • HsapDv:0000089young adult stage (human)
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.86e4
  • 2.86e4
  • 2.88e4
  • 2.92e4
  • 3.07e4
48.02
  • 48.02
  • 47.73
  • 47.03
  • 44.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001893telencephalon
  • HsapDv:0000087human adult stage (human)
2.90e4
  • 2.90e4
47.32
  • 47.32
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.93e4
  • 2.93e4
  • 3.15e4
  • 3.20e4
  • 3.39e4
  • 3.42e4
46.89
  • 46.89
  • 42.89
  • 41.97
  • 38.54
  • 37.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • HsapDv:0000088human early adulthood stage (human)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.94e4
  • 2.94e4
  • 3.15e4
  • 3.20e4
46.69
  • 46.69
  • 42.85
  • 41.81
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0000104life cycle
  • HsapDv:0000092human middle aged stage (human)
  • UBERON:0000113post-juvenile adult stage
3.16e4
  • 3.16e4
  • 3.16e4
  • 3.81e4
42.64
  • 42.64
  • 42.57
  • 30.79
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001323tibial nerve
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.17e4
  • 3.17e4
  • 3.24e4
42.50
  • 42.50
  • 41.22
AEIR
  • AEIR
  • AEIR
UBERON:0001496ascending aorta
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
3.18e4
  • 3.18e4
  • 3.30e4
  • 3.35e4
42.33
  • 42.33
  • 40.09
  • 39.15
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • HsapDv:0000089young adult stage (human)
  • UBERON:0000113post-juvenile adult stage
3.22e4
  • 3.22e4
  • 3.45e4
41.45
  • 41.45
  • 37.43
AEIR
  • AEIR
  • AEIR
UBERON:0001150body of pancreas
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.37e4
  • 3.37e4
  • 3.40e4
  • 3.78e4
38.81
  • 38.81
  • 38.32
  • 31.35
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species8 genesCompare expression
Boreoeutheria13 species14 genesCompare expression
Theria14 species15 genesCompare expression
Amniota16 species17 genesCompare expression
Tetrapoda17 species18 genesCompare expression
Euteleostomi18 species19 genesCompare expression
Bilateria19 species20 genesCompare expression

Orthology information comes from OMA : ENSG00000131914.

Cross-references

CCDSCCDS280 (CCDS280.1)
EnsemblENSG00000131914 (LIN28A)
HGNCHGNC:15986 (LIN28A)
EMBLAF521099, AK022519, AL513365, BC028566
OncoMXLIN28A (LIN28A)
Uniprot/SWISSPROTLN28A_HUMAN, Q9H9Z2

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