We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

H. sapiens Gene: SCP2D1 - ENSG00000132631 - Homo sapiens (human)

General information

Ensembl IDENSG00000132631
NameSCP2D1
DescriptionSCP2 sterol-binding domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16211]
OrganismHomo sapiens (human)
Synonym(s)c20orf79, dj1068e13.2, hsd22, q548a4
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004533left testis
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
2.18e3
  • 2.18e3
  • 2.69e3
  • 2.85e3
  • 3.43e3
  • 3.44e3
  • 4.24e3
96.05
  • 96.05
  • 95.11
  • 94.84
  • 93.77
  • 93.76
  • 92.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004534right testis
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
2.38e3
  • 2.38e3
  • 2.56e3
  • 2.74e3
  • 5.51e3
  • 1.07e4
95.68
  • 95.68
  • 95.35
  • 95.03
  • 90.00
  • 80.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0034920infant stage
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009580 year-old and over human stage (human)
  • HsapDv:0000089young adult stage (human)
  • UBERON:0000104life cycle
4.34e3
  • 4.34e3
  • 5.15e3
  • 5.81e3
  • 5.89e3
  • 6.52e3
  • 6.73e3
  • 7.23e3
  • 1.77e4
92.12
  • 92.12
  • 90.64
  • 89.46
  • 89.32
  • 88.16
  • 87.79
  • 86.88
  • 67.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000019sperm
  • HsapDv:0000088human early adulthood stage (human)
5.18e3
  • 5.18e3
90.59
  • 90.59
AEIR
  • AEIR
UBERON:0007023adult organism
  • HsapDv:0000087human adult stage (human)
1.34e4
  • 1.34e4
75.64
  • 75.64
AEIR
  • AEIR
UBERON:0015488sural nerve
  • HsapDv:000009025-44 year-old human stage (human)
1.65e4
  • 1.65e4
70.08
  • 70.08
AEIR
  • AEIR
UBERON:0001388gastrocnemius
  • UBERON:0000104life cycle
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
2.12e4
  • 2.12e4
  • 4.21e4
  • 4.28e4
  • 4.29e4
61.55
  • 61.55
  • 23.58
  • 22.37
  • 22.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000467anatomical system
  • UBERON:0007220late embryonic stage
  • UBERON:0000104life cycle
2.62e4
  • 2.62e4
  • 3.27e4
52.40
  • 52.40
  • 40.66
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.86e4
  • 2.86e4
  • 3.21e4
  • 4.14e4
48.04
  • 48.04
  • 41.73
  • 24.75
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.09e4
  • 3.09e4
  • 4.28e4
  • 4.39e4
  • 4.59e4
43.94
  • 43.94
  • 22.23
  • 20.26
  • 16.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0000104life cycle
3.21e4
  • 3.21e4
41.76
  • 41.76
AEIR
  • AEIR
UBERON:0000014zone of skin
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.22e4
  • 3.22e4
  • 3.23e4
  • 4.38e4
41.52
  • 41.52
  • 41.33
  • 20.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.24e4
  • 3.24e4
  • 4.03e4
41.18
  • 41.18
  • 26.76
AEIR
  • AEIR
  • AEIR
UBERON:0002367prostate gland
  • UBERON:0000104life cycle
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.24e4
  • 3.24e4
  • 4.07e4
  • 4.15e4
  • 4.34e4
  • 4.36e4
  • 4.55e4
  • 4.58e4
41.16
  • 41.16
  • 26.09
  • 24.59
  • 21.11
  • 20.88
  • 17.46
  • 16.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.56e4
  • 3.56e4
  • 3.70e4
  • 3.89e4
  • 4.22e4
  • 4.27e4
35.32
  • 35.32
  • 32.80
  • 29.29
  • 23.33
  • 22.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007610tibial artery
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
4.26e4
  • 4.26e4
  • 4.27e4
  • 4.31e4
22.69
  • 22.69
  • 22.54
  • 21.76
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001511skin of leg
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.32e4
  • 4.32e4
  • 4.40e4
21.56
  • 21.56
  • 20.19
AEIR
  • AEIR
  • AEIR
UBERON:0001416skin of abdomen
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.34e4
  • 4.34e4
  • 4.46e4
21.18
  • 21.18
  • 19.09
AEIR
  • AEIR
  • AEIR
UBERON:0001323tibial nerve
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.43e4
  • 4.43e4
  • 4.52e4
  • 4.57e4
  • 4.63e4
19.60
  • 19.60
  • 17.98
  • 17.02
  • 16.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001120left lobe of thyroid gland
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
4.45e4
  • 4.45e4
  • 4.73e4
19.23
  • 19.23
  • 14.14
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression

Orthology information comes from OMA : ENSG00000132631.

Cross-references

CCDSCCDS13139 (CCDS13139.1)
EnsemblENSG00000132631 (SCP2D1)
HGNCHGNC:16211 (SCP2D1)
EMBLAF418568, AF418570, AL035563, BC105121, BC112024
OncoMXSCP2D1 (SCP2D1)
Uniprot/SWISSPROTQ9UJQ7, SCP2D_HUMAN

Do not show this banner again