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H. sapiens Gene: LBX1 - ENSG00000138136 - Homo sapiens (human)

General information

Ensembl IDENSG00000138136
NameLBX1
Descriptionladybird homeobox 1 [Source:HGNC Symbol;Acc:HGNC:16960]
OrganismHomo sapiens (human)
Synonym(s)b9ega2, homeobox, hpx-6, hpx6, lbx1h, q05bb2
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:000009465-79 year-old human stage (human)
  • UBERON:0000104life cycle
5.67e3
  • 5.67e3
  • 7.63e3
  • 1.89e4
89.70
  • 89.70
  • 86.15
  • 65.69
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001383muscle of leg
  • HsapDv:0000088human early adulthood stage (human)
6.56e3
  • 6.56e3
88.10
  • 88.10
AEIR
  • AEIR
UBERON:0001388gastrocnemius
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
7.88e3
  • 7.88e3
  • 8.41e3
  • 8.59e3
  • 8.76e3
  • 9.11e3
  • 9.33e3
85.69
  • 85.69
  • 84.73
  • 84.40
  • 84.10
  • 83.47
  • 83.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
9.90e3
  • 9.90e3
82.02
  • 82.02
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • HsapDv:000009580 year-old and over human stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
1.40e4
  • 1.40e4
  • 1.69e4
  • 1.93e4
  • 2.24e4
  • 2.40e4
74.65
  • 74.65
  • 69.34
  • 65.02
  • 59.31
  • 56.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006469C1 segment of cervical spinal cord
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
1.53e4
  • 1.53e4
  • 2.00e4
  • 2.09e4
  • 2.69e4
  • 2.77e4
72.27
  • 72.27
  • 63.72
  • 62.14
  • 51.10
  • 49.77
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
1.66e4
  • 1.66e4
69.81
  • 69.81
AEIR
  • AEIR
UBERON:0014890right hemisphere of cerebellum
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
1.72e4
  • 1.72e4
  • 1.98e4
  • 2.00e4
  • 2.02e4
68.71
  • 68.71
  • 64.08
  • 63.78
  • 63.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002245cerebellar hemisphere
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:000009025-44 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:000009465-79 year-old human stage (human)
1.91e4
  • 1.91e4
  • 2.02e4
  • 2.05e4
  • 2.06e4
  • 2.06e4
  • 2.09e4
65.38
  • 65.38
  • 63.26
  • 62.75
  • 62.57
  • 62.56
  • 62.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • HsapDv:0000199fifth LMP month human stage (human)
2.53e4
  • 2.53e4
54.03
  • 54.03
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • HsapDv:0000087human adult stage (human)
3.32e4
  • 3.32e4
39.74
  • 39.74
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • HsapDv:000009465-79 year-old human stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.62e4
  • 3.62e4
  • 3.79e4
  • 3.92e4
34.33
  • 34.33
  • 31.24
  • 28.89
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001830minor salivary gland
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000091human late adulthood stage (human)
3.64e4
  • 3.64e4
  • 3.82e4
33.87
  • 33.87
  • 30.59
AEIR
  • AEIR
  • AEIR
UBERON:0002810right frontal lobe
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.65e4
  • 3.65e4
  • 3.83e4
33.71
  • 33.71
  • 30.45
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • UBERON:0000104life cycle
3.76e4
  • 3.76e4
  • 3.89e4
  • 3.98e4
  • 4.01e4
  • 4.21e4
31.66
  • 31.66
  • 29.29
  • 27.70
  • 27.18
  • 23.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001323tibial nerve
  • HsapDv:0000088human early adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
3.86e4
  • 3.86e4
  • 4.36e4
29.83
  • 29.83
  • 20.87
AEIR
  • AEIR
  • AEIR
UBERON:0001511skin of leg
  • HsapDv:0000091human late adulthood stage (human)
  • HsapDv:0000087human adult stage (human)
  • HsapDv:0000092human middle aged stage (human)
3.89e4
  • 3.89e4
  • 3.91e4
  • 4.03e4
29.39
  • 29.39
  • 28.93
  • 26.81
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013540Brodmann (1909) area 9
  • HsapDv:000009465-79 year-old human stage (human)
3.93e4
  • 3.93e4
28.59
  • 28.59
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • HsapDv:0000091human late adulthood stage (human)
  • UBERON:0000113post-juvenile adult stage
  • HsapDv:0000092human middle aged stage (human)
  • HsapDv:0000087human adult stage (human)
4.01e4
  • 4.01e4
  • 4.09e4
  • 4.23e4
  • 4.24e4
27.14
  • 27.14
  • 25.69
  • 23.27
  • 23.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Amniota14 species14 genesCompare expression

Orthology information comes from OMA : ENSG00000138136.

Cross-references

CCDSCCDS31270 (CCDS31270.1)
EnsemblENSG00000138136 (LBX1)
HGNCHGNC:16960 (LBX1)
EMBLAL135794, BC069156, BC136321, CH471066, X90828
OncoMXLBX1 (LBX1)
Uniprot/SWISSPROTLBX1_HUMAN, P52954

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